RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ETAA1Q9NY74 926 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 PRSS50Q9UI38 385 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 ARHGAP21Q5T5U3 1957 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 GGT3PA6NGU5 568 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 BOLA2-SMG1P6H3BVE0 249 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 ZNHIT1O43257 154 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 KDM4BO94953 1096 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 GDNFP39905 211 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 RNF121Q9H920 327 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 CLCF1Q9UBD9 225 aa23.13■■□□□ 1.29
LDB1-202ENST00000425280 GABRA1P14867 456 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 MRPS10P82664 201 aaKnown RBP23.12■■□□□ 1.29
LDB1-202ENST00000425280 CD300CQ08708 224 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 PLET1Q6UQ28 207 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 RNF144BQ7Z419 303 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 FCAMRQ8WWV6 532 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 TAAR6Q96RI8 345 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 ATG5Q9H1Y0 275 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 URB1O60287 2271 aaKnown RBP23.12■■□□□ 1.29
LDB1-202ENST00000425280 CFAP47Q6ZTR5 3102 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 BTCP35070 178 aa23.12■■□□□ 1.29
LDB1-202ENST00000425280 KLF9Q13886 244 aaPredicted RBP23.12■■□□□ 1.29
LDB1-202ENST00000425280 MYEF2Q9P2K5 600 aaKnown RBP23.12■■□□□ 1.29
LDB1-202ENST00000425280 GFRA3O60609 400 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 LCATP04180 440 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 SLC6A1P30531 599 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 THBS4P35443 961 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 ZNF93P35789 620 aaPredicted RBP23.11■■□□□ 1.29
LDB1-202ENST00000425280 OR10K2Q6IF99 312 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 P4HA3Q7Z4N8 544 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 CPEB3Q8NE35 698 aaKnown RBP23.11■■□□□ 1.29
LDB1-202ENST00000425280 CCDC54Q8NEL0 328 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 SPACA5Q96QH8 159 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 PLSCR2Q9NRY7 297 aa23.11■■□□□ 1.29
LDB1-202ENST00000425280 RBMX2Q9Y388 322 aaKnown RBP23.11■■□□□ 1.29
LDB1-202ENST00000425280 IGKV1-9A0A0C4DH69 117 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 CAPZA1P52907 286 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 OR2AE1Q8NHA4 323 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 PTX4Q96A99 478 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 GMPPAQ96IJ6 420 aaPredicted RBP23.1■■□□□ 1.29
LDB1-202ENST00000425280 SCNM1Q9BWG6 230 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 MTRF1O75570 445 aaKnown RBP23.1■■□□□ 1.29
LDB1-202ENST00000425280 PDGFAP04085 211 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 FAHP16930 419 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 AGAP6Q5VW22 663 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 DNM1P46Q6ZS02 220 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 CDH26Q8IXH8 852 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 PHF21AQ96BD5 680 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 ITPKCQ96DU7 683 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 REEP6Q96HR9 211 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 KLK11Q9UBX7 282 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 PIGLQ9Y2B2 252 aa23.1■■□□□ 1.29
LDB1-202ENST00000425280 TRAV18A0A075B6X5 111 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 MEIOCA2RUB1 952 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 SS18L1O75177 396 aaPredicted RBP23.09■■□□□ 1.29
LDB1-202ENST00000425280 HLA-HP01893 362 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 PLA1AQ53H76 456 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 SSC4DQ8WTU2 575 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 CHAC2Q8WUX2 184 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 FRYQ5TBA9 3013 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 MED12LQ86YW9 2145 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 ZNF503-AS2A6NEH8 195 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 BPNT1O95861 308 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 ALDOBP05062 364 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 OR3A2P47893 321 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 DYRK1AQ13627 763 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 RSBN1Q5VWQ0 802 aaPredicted RBP23.09■■□□□ 1.29
LDB1-202ENST00000425280 UPRTQ96BW1 309 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 TRIB1Q96RU8 372 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 ATPIF1Q9UII2 106 aa23.09■■□□□ 1.29
LDB1-202ENST00000425280 CENPXA8MT69 81 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 HCKP08631 526 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 RAB6AP20340 208 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 QRFPP83859 136 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 FBXW9Q5XUX1 488 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 Q6ZS92 163 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 PP6455Q8WZ26 134 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 SARAFQ96BY9 339 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 C10orf35Q96D05 121 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 GAL3ST1Q99999 423 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 B3GNT2Q9NY97 397 aa23.08■■□□□ 1.29
LDB1-202ENST00000425280 MRPL15Q9P015 296 aaKnown RBP23.08■■□□□ 1.29
LDB1-202ENST00000425280 A0A0B4J293 547 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 UTS2BQ765I0 119 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 ANGPTL5Q86XS5 388 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 PAQR4Q8N4S7 273 aaPredicted RBP23.07■■□□□ 1.28
LDB1-202ENST00000425280 OR5M9Q8NGP3 310 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 HPS1Q92902 700 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 C7orf50Q9BRJ6 194 aaKnown RBP23.07■■□□□ 1.28
LDB1-202ENST00000425280 MARVELD1Q9BSK0 173 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 CHST5Q9GZS9 411 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 NOX3Q9HBY0 568 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 GLRX2Q9NS18 164 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 RAB22AQ9UL26 194 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 SSUH2Q9Y2M2 353 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 HOXD11P31277 338 aaPredicted RBP23.07■■□□□ 1.28
LDB1-202ENST00000425280 PMPCAQ10713 525 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 UNC119Q13432 240 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 UBE2V2Q15819 145 aa23.07■■□□□ 1.28
LDB1-202ENST00000425280 AWAT2Q6E213 333 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms