RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 MBTPS2O43462 519 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 PRKNO60260 465 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 LMX1BO60663 402 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 FBXO24O75426 580 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 PMP2P02689 132 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 LIPCP11150 499 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 PMELP40967 661 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 MEOX2P50222 304 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 SLC25A53Q5H9E4 307 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF585AQ6P3V2 769 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 BTNL8Q6UX41 500 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 CLEC18BQ6UXF7 455 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 GKN2Q86XP6 184 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 OR5AS1Q8N127 324 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 C15orf54Q8N8G6 183 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 CCDC54Q8NEL0 328 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 LILRB1Q8NHL6 650 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 TMED6Q8WW62 240 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 TSLPQ969D9 159 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 NKD1Q969G9 470 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF775Q96BV0 537 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 ZDHHC12Q96GR4 267 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 GAL3ST4Q96RP7 486 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 C12orf57Q99622 126 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 GAL3ST1Q99999 423 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 RTBDNQ9BSG5 229 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 MRPL13Q9BYD1 178 aaKnown RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 SEC61A2Q9H9S3 476 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 TREM1Q9NP99 234 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 SMCO4Q9NRQ5 59 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 ALKBH4Q9NXW9 302 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 MEX3AA1L020 520 aaKnown RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF705EA8MWA4 302 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 RNASEK-C17orf49H0YIS7 233 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 CDC14BO60729 498 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 CST4P01036 141 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 FCGR3AP08637 254 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 RPS2P15880 293 aaKnown RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 LAP3P28838 519 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 GNALP38405 381 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 TFF2Q03403 129 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 C17orf67Q0P5P2 114 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 OR5H2Q8NGV7 314 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 DDIT4LQ96D03 193 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 NKX3-1Q99801 234 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 ESRP2Q9H6T0 727 aaKnown RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 SEMA5BQ9P283 1151 aa13.5□□□□□ -0.25
C9orf3-204ENST00000424143 RPH3AQ9Y2J0 694 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 MRPS28Q9Y2Q9 187 aaKnown RBP13.5□□□□□ -0.25
C9orf3-204ENST00000424143 A0A0A6YYD4 124 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 IGHV5-51A0A0C4DH38 117 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 A0A1W2PPC4 97 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 FOXI3A8MTJ6 420 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-204ENST00000424143 PRSS44E7EML9 344 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 RRP8O43159 456 aaKnown RBP13.49□□□□□ -0.25
C9orf3-204ENST00000424143 S100A8P05109 93 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 HLA-DOBP13765 273 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 PRF1P14222 555 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF20P17024 532 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 CTSSP25774 331 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 ADH6P28332 368 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 MSX1P28360 303 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 NPBWR1P48145 328 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 UCP2P55851 309 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 HTRA3P83110 453 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 C1orf61Q13536 156 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF239Q16600 458 aaKnown RBP13.49□□□□□ -0.25
C9orf3-204ENST00000424143 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 SLC22A6Q4U2R8 563 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 PLAC9Q5JTB6 97 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 TMEM268Q5VZI3 342 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 TMEM88Q6PEY1 159 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 FBXO46Q6PJ61 603 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-204ENST00000424143 POMZP3Q6PJE2 187 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 OGFOD3Q6PK18 319 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 CBLN2Q8IUK8 224 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 METTL27Q8N6F8 245 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-204ENST00000424143 TGM7Q96PF1 710 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 MICU1Q9BPX6 476 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 OR11A1Q9GZK7 315 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 PTGES2Q9H7Z7 377 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 SOHLH2Q9NX45 425 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 PPP4R1LQ9P1A2 415 aa13.49□□□□□ -0.25
C9orf3-204ENST00000424143 MYEF2Q9P2K5 600 aaKnown RBP13.49□□□□□ -0.25
C9orf3-204ENST00000424143 ALPK2Q86TB3 2170 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 COLCA2A8K830 154 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF878C9JN71 531 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 CRYBA1P05813 215 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 DVL1P1P54792 670 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-204ENST00000424143 F2RL1P55085 397 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 TMEM50BP56557 158 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 FAM3AP98173 230 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 PDZK1IP1Q13113 114 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 PEA15Q15121 130 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 OR7A5Q15622 319 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF542PQ5EBM4 170 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms