RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CFHR1Q03591 330 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 MEF2DQ14814 521 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 TOMM20Q15388 145 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 OGFOD3Q6PK18 319 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 OR1M1Q8NGA1 313 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 NANPQ8TBE9 248 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 COL25A1Q9BXS0 654 aaPredicted RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 G6PC2Q9NQR9 355 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 ZFP57Q9NU63 452 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 TMEM100Q9NV29 134 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 IGHV1OR21-1A0A087WYE8 117 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 TEX13DA0A0J9YY54 714 aaPredicted RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 LNP1A1A4G5 178 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 C9JQL5 133 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 H0YIG0 161 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 ACAA1P09110 424 aaPredicted RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 GLB1P16278 677 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 PTGFRP43088 359 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 NPY4RP50391 375 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 RPL27P61353 136 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 SNRPEP62304 92 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 ELAVL1Q15717 326 aaKnown RBP12.75□□□□□ -0.37
MSH5-206ENST00000423982 ZNF585AQ6P3V2 769 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 DCXRQ7Z4W1 244 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 SLC30A7Q8NEW0 376 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 OR52N5Q8NH56 324 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 ZNF519Q8TB69 540 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 RNF141Q8WVD5 230 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 ADAM19Q9H013 955 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 CENPMQ9NSP4 180 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 SLC2A8Q9NY64 477 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 OR52A1Q9UKL2 312 aa12.75□□□□□ -0.37
MSH5-206ENST00000423982 IGKV1D-43A0A0B4J1Z2 117 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 TMEM269A0A1B0GVZ9 245 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 PRSS44E7EML9 344 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 SRSF10O75494 262 aaKnown RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 RCC1P18754 421 aaPredicted RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 IGLV3-21P80748 117 aaPredicted RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 TGIF1Q15583 401 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 SGCAQ16586 387 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 AVPI1Q5T686 147 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 KCTD18Q6PI47 426 aaPredicted RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 C17orf82Q86X59 251 aaPredicted RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 LYPD6Q86Y78 171 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 FOXRED2Q8IWF2 684 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 STOML3Q8TAV4 291 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 GPR119Q8TDV5 335 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 ASB17Q8WXJ9 295 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 CLDN4O14493 209 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 NUDT21O43809 227 aaKnown RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 SNAPINO95295 136 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 DUS4LO95620 317 aaKnown RBP12.74□□□□□ -0.37
MSH5-206ENST00000423982 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 ABOP16442 354 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 FSTP19883 344 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 COX15Q7KZN9 410 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 TMPRSS9Q7Z410 1059 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 EDARQ9UNE0 448 aa12.74□□□□□ -0.37
MSH5-206ENST00000423982 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
MSH5-206ENST00000423982 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
MSH5-206ENST00000423982 IFNA6P05013 189 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 NAT2P11245 290 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 CD1CP29017 333 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 C1orf100Q5SVJ3 147 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 PTPMT1Q8WUK0 201 aaPredicted RBP12.73□□□□□ -0.37
MSH5-206ENST00000423982 TSLPQ969D9 159 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 ADAT3Q96EY9 351 aaPredicted RBP12.73□□□□□ -0.37
MSH5-206ENST00000423982 RHOFQ9HBH0 211 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 MMP26Q9NRE1 261 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 R4GMQ9 66 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 RALGAPA1Q6GYQ0 2036 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 FAM221BA6H8Z2 402 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 LILRA5A6NI73 299 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 IL33O95760 270 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 SERPINA5P05154 406 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 RORAP35398 523 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 SLC37A1P57057 533 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 PJVKQ0ZLH3 352 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 SWI5Q1ZZU3 235 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 PRTGQ2VWP7 1150 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 SLC23A3Q6PIS1 610 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 ZDHHC22Q8N966 263 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 TMEM230Q96A57 120 aa12.73□□□□□ -0.37
MSH5-206ENST00000423982 ZNF775Q96BV0 537 aaPredicted RBP12.73□□□□□ -0.37
MSH5-206ENST00000423982 PARP12Q9H0J9 701 aaKnown RBP12.73□□□□□ -0.37
MSH5-206ENST00000423982 RCC2Q9P258 522 aaKnown RBP12.73□□□□□ -0.37
MSH5-206ENST00000423982 CPAMD8Q8IZJ3 1885 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 CNOT1A5YKK6 2376 aaKnown RBP12.72□□□□□ -0.37
MSH5-206ENST00000423982 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 A0A1W2PP11 408 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 PQLC2LA1A4F0 135 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 METTL21EPA6NDL7 271 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 HSPB2A8KAH6 182 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 DUX1O43812 170 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 CER1O95813 267 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms