RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ARFRP1Q13795 201 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 UBALD2Q8IYN6 164 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 CLEC1AQ8NC01 280 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ST8SIA4Q92187 359 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ARHGAP5-AS1Q96IT6 56 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 LYZL4Q96KX0 146 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 OXGR1Q96P68 337 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 SIGLEC12Q96PQ1 595 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 PDCD10Q9BUL8 212 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ARL6Q9H0F7 186 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
PTPRN-204ENST00000423636 RHBDD3Q9Y3P4 386 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 TACC2O95359 2948 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF292O60281 2723 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 RAB27BO00194 218 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 HSPB6O14558 160 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 RAD51DO75771 328 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 FGF5P12034 268 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 FCGR2AP12318 317 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 S100A1P23297 94 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 MAP2K6P52564 334 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 HGFACQ04756 655 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 GK2Q14410 553 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-204ENST00000423636 SLC9A3R2Q15599 337 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 THEM4Q5T1C6 240 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 TMEM244Q5VVB8 128 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 TIGD3Q6B0B8 471 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 TEX261Q6UWH6 196 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 NIPAL2Q9H841 368 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 U3KQ87 197 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 SVEP1Q4LDE5 3571 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ANKRD11Q6UB99 2663 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-204ENST00000423636 MUC6Q6W4X9 2439 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF878C9JN71 531 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 I3L521 148 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 LGALS8O00214 317 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF208O43345 1280 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 WISP2O76076 250 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 P04436 131 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 RRADP55042 308 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 DCAF12Q5T6F0 453 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 METTL11BQ5VVY1 283 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 CREB3L2Q70SY1 520 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 PPP1R32Q7Z5V6 425 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ARMC10Q8N2F6 343 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 OR5D14Q8NGL3 314 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 MARCH1Q8TCQ1 289 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 IFT46Q9NQC8 304 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF701Q9NV72 531 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF629Q9UEG4 869 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-204ENST00000423636 PIGLQ9Y2B2 252 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 TPRP12270 2363 aaKnown RBP10.49□□□□□ -0.73
PTPRN-204ENST00000423636 TMEM82A0PJX8 343 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 L7N2F9 121 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 M0R233 179 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 TOX3O15405 576 aaPredicted RBP10.49□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF432O94892 652 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 HLA-AP01891 365 aaKnown RBP10.49□□□□□ -0.73
PTPRN-204ENST00000423636 IGFBP3P17936 291 aaPredicted RBP10.49□□□□□ -0.73
PTPRN-204ENST00000423636 CD96P40200 585 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 RBMS2Q15434 407 aaKnown RBP10.49□□□□□ -0.73
PTPRN-204ENST00000423636 PLAC9Q5JTB6 97 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 OPN5Q6U736 354 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 LIX1LQ8IVB5 337 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 ELMOD2Q8IZ81 293 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 OR9K2Q8NGE7 335 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 OR6M1Q8NGM8 313 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 PHYHIPQ92561 330 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 HEXA-AS1Q9H8Q6 139 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 CALHM2Q9HA72 323 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 VSIG4Q9Y279 399 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 ETV7Q9Y603 341 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 MEX3AA1L020 520 aaKnown RBP10.49□□□□□ -0.73
PTPRN-204ENST00000423636 CER1O95813 267 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 LCATP04180 440 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 ACHEP22303 614 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 OPRM1P35372 400 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 CARD18P57730 90 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 IL11RAQ14626 422 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 UBE2V2Q15819 145 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 ACER2Q5QJU3 275 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 AKAP7Q9P0M2 348 aaPredicted RBP10.49□□□□□ -0.73
PTPRN-204ENST00000423636 CSAG2Q9Y5P2 127 aa10.49□□□□□ -0.73
PTPRN-204ENST00000423636 AQP7P3A6NL99 342 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 OR2AT4A6NND4 320 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 MPTX1A8MV57 137 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CENPBD1B2RD01 187 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 SLC33A1O00400 549 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CTDSPLO15194 276 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ZFP36L1Q07352 338 aaKnown RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 RSPO1Q2MKA7 263 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-204ENST00000423636 C6orf201Q7Z4U5 140 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CARFQ8N187 725 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 OR51T1Q8NGJ9 327 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 SORCS2Q96PQ0 1159 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 GPHA2Q96T91 129 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 POTEKPQ9BYX7 375 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CST11Q9H112 138 aa10.48□□□□□ -0.73
PTPRN-204ENST00000423636 CLEC4MQ9H2X3 399 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms