RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 EPHA2P29317 976 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 DDOSTP39656 456 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 DVL1P1P54792 670 aaPredicted RBP9.25□□□□□ -0.93
USP49-204ENST00000423567 ZNF121P58317 390 aaPredicted RBP9.25□□□□□ -0.93
USP49-204ENST00000423567 CDC42P60953 191 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 ZNF92Q03936 586 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 OR8G1Q15617 311 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 SNCBQ16143 134 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 GFOD2Q3B7J2 385 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 C12orf73Q69YU5 71 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 MEPCEQ7L2J0 689 aaKnown RBP9.25□□□□□ -0.93
USP49-204ENST00000423567 C1orf87Q8N0U7 546 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 FTMTQ8N4E7 242 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 KLHL36Q8N4N3 616 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 SPICQ8N5J4 248 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 SPERTQ8NA61 448 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 OR51F2Q8NH61 342 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 ASB17Q8WXJ9 295 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 ERGIC1Q969X5 290 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 C1orf159Q96HA4 380 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 REEP6Q96HR9 211 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 MEGF10Q96KG7 1140 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 IL4I1Q96RQ9 567 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 AMELYQ99218 206 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 SOX7Q9BT81 388 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 ADAT1Q9BUB4 502 aaKnown RBP9.25□□□□□ -0.93
USP49-204ENST00000423567 GABARAPL3Q9BY60 117 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 MROQ9BYG7 248 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 RGCCQ9H4X1 137 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 GCM1Q9NP62 436 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 BRD7Q9NPI1 651 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 UBAP1Q9NZ09 502 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 MRPL15Q9P015 296 aaKnown RBP9.25□□□□□ -0.93
USP49-204ENST00000423567 TMEFF2Q9UIK5 374 aaPredicted RBP9.25□□□□□ -0.93
USP49-204ENST00000423567 FN1P02751 2386 aaKnown RBP9.25□□□□□ -0.93
USP49-204ENST00000423567 ZANQ9Y493 2812 aa9.25□□□□□ -0.93
USP49-204ENST00000423567 H0YL77 283 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 H3BNX3 289 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 PHYHO14832 338 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 WNT9BO14905 357 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 MLNRO43193 412 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 GMDSO60547 372 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 MSMBP08118 114 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 SBK2P0C263 348 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 ALOX5APP20292 161 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 CA6P23280 308 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 ALDH3A2P51648 485 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 PSMA6P60900 246 aaKnown RBP9.24□□□□□ -0.93
USP49-204ENST00000423567 LMO4P61968 165 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 BTG1P62324 171 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 SPRNQ5BIV9 151 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 FAM120AOSQ5T036 256 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 LRRN1Q6UXK5 716 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 KLBQ86Z14 1044 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 MUC20Q8N307 709 aaPredicted RBP9.24□□□□□ -0.93
USP49-204ENST00000423567 CELF2-AS1Q8N7Q2 184 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 OR56B2PQ8NGI1 322 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 OR8J1Q8NGP2 316 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 OR11L1Q8NGX0 322 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 STMN2Q93045 179 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 SPSB4Q96A44 273 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 TMEM186Q96B77 213 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 MNTQ99583 582 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 LPAR2Q9HBW0 351 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 S100A14Q9HCY8 104 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 IMPAD1Q9NX62 359 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 IKZF2Q9UKS7 526 aa9.24□□□□□ -0.93
USP49-204ENST00000423567 NIPBLQ6KC79 2804 aaeCLIP9.23□□□□□ -0.93
USP49-204ENST00000423567 TRAV20A0A0B4J274 112 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 IGHV3-64DA0A0J9YX35 117 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 A0A1B0GWJ7 208 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 CCDC182A6NF36 153 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 FAM157AC9JC47 383 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ZNF670-ZNF695F2Z2N8 137 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 TMEM178BH3BS89 294 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 M0R129 80 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 EI24O14681 340 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ZNF254O75437 659 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 IGHV2-5P01817 119 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ALPLP05186 524 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 FAM157CP0CG43 387 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 SRD5A1P18405 259 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ATP6V1E1P36543 226 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 SRP14P37108 136 aaKnown RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 GNALP38405 381 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 MDH2P40926 338 aaKnown RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 CD200P41217 278 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 GATA4P43694 442 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 RIDAP52758 137 aaKnown RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 POU4F2Q12837 409 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 CR1LQ2VPA4 569 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ZNF829Q3KNS6 432 aaPredicted RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 TMEM155Q4W5P6 130 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 AADACL4Q5VUY2 407 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 DEGS2Q6QHC5 323 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ZNF771Q7L3S4 317 aaPredicted RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 BCDIN3DQ7Z5W3 292 aaKnown RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 MOGAT3Q86VF5 341 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 SLC35F2Q8IXU6 374 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 CSNK2A3Q8NEV1 391 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms