RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 PYCR1P32322 319 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 CFHR2P36980 270 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 GSSP48637 474 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 MS4A2Q01362 244 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 ZNF92Q03936 586 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 PPP1R8Q12972 351 aaKnown RBP13.42□□□□□ -0.26
COL18A1-205ENST00000423214 SNAI3Q3KNW1 292 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 METTL11BQ5VVY1 283 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 LNX2Q8N448 690 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 PNLDC1Q8NA58 520 aaKnown RBP13.42□□□□□ -0.26
COL18A1-205ENST00000423214 GNPDA2Q8TDQ7 276 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 WFDC12Q8WWY7 111 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 MAP6Q96JE9 813 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 OPA3Q9H6K4 179 aa13.42□□□□□ -0.26
COL18A1-205ENST00000423214 MRPL22Q9NWU5 206 aaKnown RBP13.42□□□□□ -0.26
COL18A1-205ENST00000423214 TRAV38-1A0A0B4J264 116 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 hCG_1807616A0A1W2PRN6 198 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 LIPFP07098 398 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 RPS27P42677 84 aaKnown RBP13.41□□□□□ -0.26
COL18A1-205ENST00000423214 HOXA4Q00056 320 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-205ENST00000423214 DEFA6Q01524 100 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 MZT1Q08AG7 82 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 TSPAN31Q12999 210 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 GLYATL3Q5SZD4 288 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 RPL13AP3Q6NVV1 102 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 BRICD5Q6PL45 260 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 DRAM2Q6UX65 266 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 DHFR2Q86XF0 187 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 TMEM86BQ8N661 226 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 CYB561A3Q8NBI2 242 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 PLPP7Q8NBV4 271 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 OR2T4Q8NH00 348 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 CLPTM1LQ96KA5 538 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 FAM71F1Q96KD3 344 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-205ENST00000423214 CHIAQ9BZP6 476 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 C1orf123Q9NWV4 160 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 MRPL15Q9P015 296 aaKnown RBP13.41□□□□□ -0.26
COL18A1-205ENST00000423214 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
COL18A1-205ENST00000423214 CMYA5Q8N3K9 4069 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 OOEPA6NGQ2 149 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TVP23AA6NH52 213 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TNFRSF11BO00300 401 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 NDUFA2O43678 99 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 GRPP07492 148 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 SPARCP09486 303 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TRIM25Q14258 630 aaKnown RBP13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TAF13Q15543 124 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 MIDNQ504T8 468 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 PGBD2Q6P3X8 592 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 Q6YL49 198 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 DCXRQ7Z4W1 244 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 KIR3DL3Q8N743 410 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 SPERTQ8NA61 448 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 SCCPDHQ8NBX0 429 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 OR9Q2Q8NGE9 314 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 OR56B2PQ8NGI1 322 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 SSMEM1Q8WWF3 244 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TBX15Q96SF7 602 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 EGLN3Q9H6Z9 239 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 SMURF1Q9HCE7 757 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TBC1D23Q9NUY8 699 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 C14orf119Q9NWQ9 140 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 FAM53CQ9NYF3 392 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 TAS2R1Q9NYW7 299 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 N6AMT1Q9Y5N5 214 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 LYVE1Q9Y5Y7 322 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 POMT1Q9Y6A1 747 aa13.4□□□□□ -0.26
COL18A1-205ENST00000423214 ZNF878C9JN71 531 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 BHLHE40O14503 412 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 XRCC2O43543 280 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 KRT36O76013 467 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 PTBP3O95758 552 aaKnown RBP13.39□□□□□ -0.27
COL18A1-205ENST00000423214 GYPAP02724 150 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 MELTFP08582 738 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 MMP9P14780 707 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 OTX1P32242 354 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-205ENST00000423214 PRKXP51817 358 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 PDCD1Q15116 288 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 PDLIM3Q53GG5 364 aaPredicted RBP13.39□□□□□ -0.27
COL18A1-205ENST00000423214 OLFML2AQ68BL7 652 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 LCN8Q6JVE9 175 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 LYPD4Q6UWN0 246 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 ARHGAP24Q8N264 748 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 OR9Q1Q8NGQ5 310 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 OR8S1Q8NH09 359 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 CCDC124Q96CT7 223 aaKnown RBP13.39□□□□□ -0.27
COL18A1-205ENST00000423214 BTBD10Q9BSF8 475 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 ACOXLQ9NUZ1 547 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 TGP01266 2768 aa13.39□□□□□ -0.27
COL18A1-205ENST00000423214 CENPVL3A0A0U1RRI6 287 aa13.38□□□□□ -0.27
COL18A1-205ENST00000423214 ANKRD30BLA7E2S9 258 aa13.38□□□□□ -0.27
COL18A1-205ENST00000423214 TNFRSF13BO14836 293 aaPredicted RBP13.38□□□□□ -0.27
COL18A1-205ENST00000423214 NDUFA7O95182 113 aa13.38□□□□□ -0.27
COL18A1-205ENST00000423214 GASTP01350 101 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms