RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 IMPA2O14732 288 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 SULT1C4O75897 302 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 IFI6P09912 130 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 CD40LGP29965 261 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 C9orf152Q5JTZ5 239 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 EIF5AL1Q6IS14 154 aaKnown RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 LYPD4Q6UWN0 246 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 CCBE1Q6UXH8 406 aaPredicted RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 RBMS3Q6XE24 437 aaKnown RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 SYS1Q8N2H4 156 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 BPIFB2Q8N4F0 458 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 PHYHIPQ92561 330 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 ORAI1Q96D31 301 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 TECTBQ96PL2 329 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 CDCA4Q9BXL8 241 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 COL4A4P53420 1690 aaPredicted RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 SNRNP200O75643 2136 aaKnown RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 BTBD17A6NE02 478 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 A8MV72 311 aaPredicted RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 PPIHO43447 177 aaKnown RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 MPZL1O95297 269 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 CSF1P09603 554 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 AKAIN1P0CW23 69 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 OPRL1P41146 370 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 SRP9P49458 86 aaKnown RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 GP2P55259 537 aaKnown RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 MRPS10P82664 201 aaKnown RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 NCCRP1Q6ZVX7 275 aaPredicted RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 CDH24Q86UP0 819 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 PHC2Q8IXK0 858 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 CENPSQ8N2Z9 138 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 SPACA1Q9HBV2 294 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF355PQ9NSJ1 428 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 MGAT4CQ9UBM8 478 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 TP53TG5Q9Y2B4 290 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 RBMX2Q9Y388 322 aaKnown RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 A0A0A6YYH2 397 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 A6NJ64 397 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 UBBP0CG47 229 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 DUSP1P28562 367 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 TNFSF8P32971 234 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 PTGER4P35408 488 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 DDOSTP39656 456 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 TNK1Q13470 666 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 AADACL3Q5VUY0 350 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 OR56B2PQ8NGI1 322 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 OR6X1Q8NH79 312 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 SNAPC3Q92966 411 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 ISG20L2Q9H9L3 353 aaKnown RBP8.65□□□□□ -1.02
CMSS1-201ENST00000421999 RCE1Q9Y256 329 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 LRP12Q9Y561 859 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 CACNA1DQ01668 2161 aa8.65□□□□□ -1.02
CMSS1-201ENST00000421999 MYO18BQ8IUG5 2567 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 PIGBOS1A0A0B4J2F0 54 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF816-ZNF321PA0A0X1KG74 233 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 TRDV1A0A1B0GX56 115 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 LYRM1O43325 122 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 SCGB2A1O75556 95 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 NGFRP08138 427 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 SOX18P35713 384 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 CAV2P51636 162 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 OR10K2Q6IF99 312 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 DRAM2Q6UX65 266 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 BHLHA15Q7RTS1 189 aaPredicted RBP8.65□□□□□ -1.03
CMSS1-201ENST00000421999 SCGB1C1Q8TD33 95 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 CHPT1Q8WUD6 406 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 ELMOD3Q96FG2 381 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 OR8B4Q96RC9 309 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 SF3B5Q9BWJ5 86 aaKnown RBP8.65□□□□□ -1.03
CMSS1-201ENST00000421999 RNF167Q9H6Y7 350 aa8.65□□□□□ -1.03
CMSS1-201ENST00000421999 LY6G6EA0A0G2JKS1 128 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 H3BMH7 237 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 ANGPTL7O43827 346 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 KLF7O75840 302 aaPredicted RBP8.64□□□□□ -1.03
CMSS1-201ENST00000421999 PET100P0DJ07 73 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 CD34P28906 385 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 MTNR1BP49286 362 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 KLRB1Q12918 225 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 CDK5R1Q15078 307 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 PLPPR5Q32ZL2 321 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 CCDC58Q4VC31 144 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 FBXW12Q6X9E4 464 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 DPPA2Q7Z7J5 298 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 ADGRE4PQ86SQ3 457 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 OR1S1Q8NH92 325 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 TRMT61AQ96FX7 289 aaKnown RBP8.64□□□□□ -1.03
CMSS1-201ENST00000421999 PRRT1Q99946 306 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 PLK3Q9H4B4 646 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF224Q9NZL3 707 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 ERRFI1Q9UJM3 462 aaPredicted RBP8.64□□□□□ -1.03
CMSS1-201ENST00000421999 FAM96BQ9Y3D0 163 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 CHST2Q9Y4C5 530 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 U3KQA8 63 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 MEX3AA1L020 520 aaKnown RBP8.64□□□□□ -1.03
CMSS1-201ENST00000421999 FAM221AA4D161 298 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 ZNF701M0R085 212 aaPredicted RBP8.64□□□□□ -1.03
CMSS1-201ENST00000421999 SEMG1P04279 462 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 RPA2P15927 270 aa8.64□□□□□ -1.03
CMSS1-201ENST00000421999 JUNBP17275 347 aaPredicted RBP8.64□□□□□ -1.03
CMSS1-201ENST00000421999 CA6P23280 308 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms