RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 J3QLI3 93 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 PHF1O43189 567 aaPredicted RBP12.45□□□□□ -0.42
LINC01840-201ENST00000421870 SELENOFO60613 162 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 FOXH1O75593 365 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 AVPP01185 164 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 WNT2P09544 360 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 H2BFMP0C1H6 154 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 FCGR1AP12314 374 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 ZFP36P26651 326 aaKnown RBP12.45□□□□□ -0.42
LINC01840-201ENST00000421870 SRP14P37108 136 aaKnown RBP12.45□□□□□ -0.42
LINC01840-201ENST00000421870 MDH2P40926 338 aaKnown RBP12.45□□□□□ -0.42
LINC01840-201ENST00000421870 ZNF121P58317 390 aaPredicted RBP12.45□□□□□ -0.42
LINC01840-201ENST00000421870 FAM3AP98173 230 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 OR8G1Q15617 311 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 SLC16A9Q7RTY1 509 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 MOGAT3Q86VF5 341 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 MUC20Q8N307 709 aaPredicted RBP12.45□□□□□ -0.42
LINC01840-201ENST00000421870 THEM6Q8WUY1 208 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 LRTOMTQ8WZ04 291 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 YIPF3Q9GZM5 350 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 GABARAPL1Q9H0R8 117 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 KRT84Q9NSB2 600 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 UBAP1Q9NZ09 502 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 PCDHB10Q9UN67 800 aa12.45□□□□□ -0.42
LINC01840-201ENST00000421870 A0A0G2JMP0 313 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 A0A0X1KG70 313 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 LRRC30A6NM36 301 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 ZAR1LA6NP61 321 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 PRKYO43930 277 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 MITFO75030 526 aaPredicted RBP12.44□□□□□ -0.42
LINC01840-201ENST00000421870 CYB5R3P00387 301 aaPredicted RBP12.44□□□□□ -0.42
LINC01840-201ENST00000421870 EPHA2P29317 976 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 LCN2P80188 198 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 APOFQ13790 326 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 MPPED2Q15777 294 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 SLX4IPQ5VYV7 408 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 DEGS2Q6QHC5 323 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.44□□□□□ -0.42
LINC01840-201ENST00000421870 C1orf87Q8N0U7 546 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 RFLNBQ8N5W9 214 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 SPERTQ8NA61 448 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 OR4M2Q8NGB6 313 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 TMEM158Q8WZ71 300 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 KLHDC2Q9Y2U9 406 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 N6AMT1Q9Y5N5 214 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 COL6A5A8TX70 2615 aa12.44□□□□□ -0.42
LINC01840-201ENST00000421870 IGHV3-64DA0A0J9YX35 117 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 A8MXK9 166 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 TRAPPC2LH3BP13 241 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 ANXA2P07355 339 aaKnown RBP12.43□□□□□ -0.42
LINC01840-201ENST00000421870 CFL1P23528 166 aaKnown RBP12.43□□□□□ -0.42
LINC01840-201ENST00000421870 HCCSP53701 268 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 ZNF404Q494X3 552 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 AADACL4Q5VUY2 407 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 DCAF12L2Q5VW00 463 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 C12orf73Q69YU5 71 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 FAM57BQ71RH2 274 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 TEX29Q8N6K0 151 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 OR56B2PQ8NGI1 322 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 CENPNQ96H22 339 aaPredicted RBP12.43□□□□□ -0.42
LINC01840-201ENST00000421870 REEP6Q96HR9 211 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 PRRG3Q9BZD7 231 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 RGCCQ9H4X1 137 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 NIPAL2Q9H841 368 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 PPIAL4AQ9Y536 164 aa12.43□□□□□ -0.42
LINC01840-201ENST00000421870 hCG_38984A0A1B0GV85 526 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 CEACAM18A8MTB9 384 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 RNF212BA8MTL3 300 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 TBX1O43435 398 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 CIB2O75838 187 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 ZNF205O95201 554 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 DCTDP32321 178 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 NAA10P41227 235 aaPredicted RBP12.42□□□□□ -0.42
LINC01840-201ENST00000421870 GSK3AP49840 483 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 ACTR3P61158 418 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 SEC61A1P61619 476 aaKnown RBP12.42□□□□□ -0.42
LINC01840-201ENST00000421870 RPS7P62081 194 aaKnown RBP12.42□□□□□ -0.42
LINC01840-201ENST00000421870 TIGD6Q17RP2 521 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 PRAMEF6Q5VXH4 476 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 LRRN1Q6UXK5 716 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 MEPCEQ7L2J0 689 aaKnown RBP12.42□□□□□ -0.42
LINC01840-201ENST00000421870 ZNF771Q7L3S4 317 aaPredicted RBP12.42□□□□□ -0.42
LINC01840-201ENST00000421870 TMEM246Q9BRR3 403 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 ADAT1Q9BUB4 502 aaKnown RBP12.42□□□□□ -0.42
LINC01840-201ENST00000421870 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 OR10A2Q9H208 303 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 METTL17Q9H7H0 456 aaPredicted RBP12.42□□□□□ -0.42
LINC01840-201ENST00000421870 FN3KRPQ9HA64 309 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 MMP26Q9NRE1 261 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 DNAJC27Q9NZQ0 273 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 MIOXQ9UGB7 285 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 OPN4Q9UHM6 478 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 ENOPH1Q9UHY7 261 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 LAMP5Q9UJQ1 280 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 DNHD1Q96M86 4753 aa12.42□□□□□ -0.42
LINC01840-201ENST00000421870 ACOD1A6NK06 481 aa12.41□□□□□ -0.42
LINC01840-201ENST00000421870 ANKRD30BLA7E2S9 258 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms