RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 HPF1Q9NWY4 346 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 FOXD3Q9UJU5 478 aaPredicted RBP14.23□□□□□ -0.13
CTSB-203ENST00000420692 FBXO4Q9UKT5 387 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 VSIG4Q9Y279 399 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 KCNK7Q9Y2U2 307 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 BDP1A6H8Y1 2624 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 H3BUI4 141 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 M0R233 179 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 TLX3O43711 291 aaPredicted RBP14.23□□□□□ -0.13
CTSB-203ENST00000420692 HIST1H3AP68431 136 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 GFOD2Q3B7J2 385 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 ESCO2Q56NI9 601 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 HIST2H3PS2Q5TEC6 136 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 GLIPR1L1Q6UWM5 242 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 HIST2H3AQ71DI3 136 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 TIPARPQ7Z3E1 657 aaKnown RBP14.23□□□□□ -0.13
CTSB-203ENST00000420692 TMED4Q7Z7H5 227 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 ZNF584Q8IVC4 421 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 OR10R2Q8NGX6 335 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 ZNF775Q96BV0 537 aaPredicted RBP14.23□□□□□ -0.13
CTSB-203ENST00000420692 LIN37Q96GY3 246 aaPredicted RBP14.23□□□□□ -0.13
CTSB-203ENST00000420692 SFXN2Q96NB2 322 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 DKKL1Q9UK85 242 aa14.23□□□□□ -0.13
CTSB-203ENST00000420692 MSR1P21757 451 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 P2RX3P56373 397 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 SEC61A1P61619 476 aaKnown RBP14.22□□□□□ -0.13
CTSB-203ENST00000420692 PLAC9Q5JTB6 97 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 SFRP5Q5T4F7 317 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 DEFB123Q8N688 67 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 TNFAIP8L1Q8WVP5 186 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 CLEC4MQ9H2X3 399 aaPredicted RBP14.22□□□□□ -0.13
CTSB-203ENST00000420692 NELFAQ9H3P2 528 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 MRPS28Q9Y2Q9 187 aaKnown RBP14.22□□□□□ -0.13
CTSB-203ENST00000420692 NCOR1O75376 2440 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 OR6C65A6NJZ3 312 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 B4E171 279 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 F5H5P2 479 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 EIF1BO60739 113 aaKnown RBP14.22□□□□□ -0.13
CTSB-203ENST00000420692 CBR3O75828 277 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 STK17BO94768 372 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 TSPAN7P41732 249 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 TMEM50BP56557 158 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 GRB2P62993 217 aaKnown RBP14.22□□□□□ -0.13
CTSB-203ENST00000420692 RAC1P63000 192 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 SCGB2B2Q4G0G5 96 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 DOK3Q7L591 496 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 LRRC18Q8N456 261 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 TMEM41AQ96HV5 264 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 SLC2A8Q9NY64 477 aa14.22□□□□□ -0.13
CTSB-203ENST00000420692 SMAD9O15198 467 aaKnown RBP14.21□□□□□ -0.13
CTSB-203ENST00000420692 SOCS1O15524 211 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 DHHO43323 396 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 IFNA7P01567 189 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 ERCC1P07992 297 aaPredicted RBP14.21□□□□□ -0.13
CTSB-203ENST00000420692 RFPL3SP0C7P2 107 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 POU3F2P20265 443 aaPredicted RBP14.21□□□□□ -0.13
CTSB-203ENST00000420692 MPZP25189 248 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 SUCLG1P53597 346 aaKnown RBP14.21□□□□□ -0.13
CTSB-203ENST00000420692 DHRS2Q13268 280 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 MPPED2Q15777 294 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 CLLU1Q5K131 121 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 C1QL2Q7Z5L3 287 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 YRDCQ86U90 279 aaKnown RBP14.21□□□□□ -0.13
CTSB-203ENST00000420692 ZNF101Q8IZC7 436 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 TMEM105Q8N8V8 129 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 BANF2Q9H503 90 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 FN3KRPQ9HA64 309 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 UPB1Q9UBR1 384 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 ZNF230Q9UIE0 474 aaPredicted RBP14.21□□□□□ -0.13
CTSB-203ENST00000420692 AHCTF1Q8WYP5 2266 aa14.21□□□□□ -0.13
CTSB-203ENST00000420692 HMSDA8MTL9 139 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 NPIPA2E9PIF3 369 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 NPIPA3F8WFD2 350 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 L7N2F9 121 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 RGS11O94810 467 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 VAMP5O95183 116 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 DBHP09172 617 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 LIPCP11150 499 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 ACP1P24666 158 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 OTX2P32243 289 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 CD96P40200 585 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 CASRP41180 1078 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 CXADRP78310 365 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 PGAP1Q75T13 922 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 C12orf45Q8N5I9 185 aaPredicted RBP14.21□□□□□ -0.14
CTSB-203ENST00000420692 FBXO17Q96EF6 278 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 RBM24Q9BX46 236 aaKnown RBP14.21□□□□□ -0.14
CTSB-203ENST00000420692 UBQLN2Q9UHD9 624 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 TCFL5Q9UL49 500 aa14.21□□□□□ -0.14
CTSB-203ENST00000420692 TRAV14DV4A0A0A6YYC5 116 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 F5H5K5 113 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 ARPC5O15511 151 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 CDC14BO60729 498 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 RAD51DO75771 328 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 OTX1P32242 354 aaPredicted RBP14.2□□□□□ -0.14
CTSB-203ENST00000420692 HRH1P35367 487 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 HLXQ14774 488 aaPredicted RBP14.2□□□□□ -0.14
CTSB-203ENST00000420692 DBX2Q6ZNG2 339 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 GGNQ86UU5 652 aa14.2□□□□□ -0.14
CTSB-203ENST00000420692 C20orf196Q8IYI0 205 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 305.3 ms