RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 H3F3CQ6NXT2 135 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 FAHD2BQ6P2I3 314 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 FBXW12Q6X9E4 464 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MOB3CQ70IA8 216 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF551Q7Z340 670 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 PIWIL4Q7Z3Z4 852 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 NUDT13Q86X67 352 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 COMMD2Q86X83 199 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 BAP18Q8IXM2 172 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RTL3Q8N8U3 475 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 LMNTD1Q8N9Z9 388 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 PNLDC1Q8NA58 520 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ZFP62Q8NB50 900 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 BEST4Q8NFU0 473 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 OR11H4Q8NGC9 324 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 OR52M1Q8NGK5 317 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 OR13C8Q8NGS7 320 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 OR6K3Q8NGY3 331 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 M1APQ8TC57 530 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 GHSRQ92847 366 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SEMA4DQ92854 862 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 NTNG2Q96CW9 530 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 OTUB1Q96FW1 271 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 FAHD2AQ96GK7 314 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MARK4Q96L34 752 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SAMD8Q96LT4 415 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 IMMP1LQ96LU5 166 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MS4A4EQ96PG1 132 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MBOAT4Q96T53 435 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 CNN2Q99439 309 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 LPAR4Q99677 370 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 GINS4Q9BRT9 223 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 FUZQ9BT04 418 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM43Q9BTV4 400 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ALG8Q9BVK2 526 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RBM24Q9BX46 236 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 BARHL1Q9BZE3 327 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 C20orf27Q9GZN8 174 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 IL22Q9GZX6 179 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SAP30LQ9HAJ7 183 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 PLEKHA2Q9HB19 425 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC25A19Q9HC21 320 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM60AQ9NP50 221 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 MID1IP1Q9NPA3 183 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ALKBH4Q9NXW9 302 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ADA2Q9NZK5 511 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC17A6Q9P2U8 582 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF282Q9UDV7 671 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 TESQ9UGI8 421 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 PSG11Q9UQ72 335 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 LAMP3Q9UQV4 416 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 POFUT2Q9Y2G5 429 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ADAM18Q9Y3Q7 739 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 ORC6Q9Y5N6 252 aa4.8□□□□□ -1.64
ECHDC1-206ENST00000417628 TEX13DA0A0J9YY54 714 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 LOC100130705A0A1B0GUX0 176 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 A0A1B0GV72 72 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM159BA6NKW6 160 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF670-ZNF695F2Z2N8 137 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 OVOL3O00110 214 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 DVL1O14640 695 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 ARPC2O15144 300 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 SRPX2O60687 465 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 CLDN9O95484 217 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 CLIC3O95833 236 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 PGAM1P18669 254 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 GADD45AP24522 165 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 MPZP25189 248 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 CEACAM8P31997 349 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 GLP1RP43220 463 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 OR1D4P47884 311 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 PITPNBP48739 271 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 CDC34P49427 236 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 RGS4P49798 205 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF136P52737 540 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 EMP2P54851 167 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 DNAJB13P59910 316 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 DGCR2P98153 550 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 IL5RAQ01344 420 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 C17orf67Q0P5P2 114 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM244Q5VVB8 128 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 NSUN5P2Q63ZY6 315 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 STEAP4Q687X5 459 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 KCTD11Q693B1 232 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM71E1Q6IPT2 247 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM270Q6UE05 265 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 IL34Q6ZMJ4 242 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 Q6ZWC4 215 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 THOC6Q86W42 341 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 VRK2Q86Y07 508 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 PTOV1Q86YD1 416 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 WDFY1Q8IWB7 410 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 RIMKLAQ8IXN7 391 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 FTMTQ8N4E7 242 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC5A8Q8N695 610 aa4.79□□□□□ -1.64
ECHDC1-206ENST00000417628 METTL27Q8N6F8 245 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms