RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 LCATP04180 440 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 RBMXP38159 391 aaKnown RBP15.16■□□□□ 0.02
VCP-202ENST00000417448 CDC42P60953 191 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 HNRNPA0Q13151 305 aaKnown RBP15.16■□□□□ 0.02
VCP-202ENST00000417448 NKPD1Q17RQ9 610 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 NXNL2Q5VZ03 156 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 ARL9Q6T311 187 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 ZNF771Q7L3S4 317 aaPredicted RBP15.16■□□□□ 0.02
VCP-202ENST00000417448 CMBLQ96DG6 245 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 TBX5Q99593 518 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 BRD7Q9NPI1 651 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 TBCCD1Q9NVR7 557 aa15.16■□□□□ 0.02
VCP-202ENST00000417448 DNAJC9-AS1A6NH13 148 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 J3QLI3 93 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 M0R135 149 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 ENTPD6O75354 484 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 PRTN3P24158 256 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 GCH1P30793 250 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 SLC6A9P48067 706 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 EVX1P49640 407 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 TPTEP56180 551 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 ECH1Q13011 328 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 PSG7Q13046 419 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 SNAI3Q3KNW1 292 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 LCN1P1Q5VSP4 162 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 LRRN1Q6UXK5 716 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 SLC16A9Q7RTY1 509 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 OR5AS1Q8N127 324 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 ZNF283Q8N7M2 679 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 OR51G2Q8NGK0 314 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 OTOSQ8NHW6 89 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 ZNF799Q96GE5 643 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 SLITRK2Q9H156 845 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 MS4A5Q9H3V2 200 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 DCLRE1BQ9H816 532 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 SMPD3Q9NY59 655 aaPredicted RBP15.15■□□□□ 0.02
VCP-202ENST00000417448 SLCO1C1Q9NYB5 712 aa15.15■□□□□ 0.02
VCP-202ENST00000417448 IGLV3-9A0A075B6K5 115 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 LOC100130705A0A1B0GUX0 176 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 ICMTO60725 284 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 LYNP07948 512 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 AVPI1Q5T686 147 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 OGFRL1Q5TC84 451 aaPredicted RBP15.14■□□□□ 0.01
VCP-202ENST00000417448 DCAF12L2Q5VW00 463 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 OR8J1Q8NGP2 316 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 OR2AE1Q8NHA4 323 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 RNF133Q8WVZ7 376 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 NRG4Q8WWG1 115 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 CYGBQ8WWM9 190 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 SPTSSAQ969W0 71 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 APOBEC3DQ96AK3 386 aaPredicted RBP15.14■□□□□ 0.01
VCP-202ENST00000417448 DCLRE1CQ96SD1 692 aaKnown RBP15.14■□□□□ 0.01
VCP-202ENST00000417448 ADGRL4Q9HBW9 690 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 MSL2Q9HCI7 577 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 ATPIF1Q9UII2 106 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 LAMP5Q9UJQ1 280 aa15.14■□□□□ 0.01
VCP-202ENST00000417448 POM121CA8CG34 1229 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 ZNF878C9JN71 531 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 IGHV3-13P01766 116 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 H2BFMP0C1H6 154 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 ALOX5APP20292 161 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 FPR2P25090 351 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 MAGEB1P43366 347 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 CX3CR1P49238 355 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 SELENOVP59797 346 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 IL13RA1P78552 427 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 MRPS11P82912 194 aaKnown RBP15.13■□□□□ 0.01
VCP-202ENST00000417448 SRSF4Q08170 494 aaKnown RBP15.13■□□□□ 0.01
VCP-202ENST00000417448 TSTQ16762 297 aaKnown RBP15.13■□□□□ 0.01
VCP-202ENST00000417448 SPRNQ5BIV9 151 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 MBNL2Q5VZF2 373 aaKnown RBP15.13■□□□□ 0.01
VCP-202ENST00000417448 OR2T2Q6IF00 324 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 DOK3Q7L591 496 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 GID4Q8IVV7 300 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 SLC35F2Q8IXU6 374 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 ENTHD1Q8IYW4 607 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 CNN2Q99439 309 aaKnown RBP15.13■□□□□ 0.01
VCP-202ENST00000417448 KCNJ15Q99712 375 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 YIPF3Q9GZM5 350 aa15.13■□□□□ 0.01
VCP-202ENST00000417448 ZSCAN5BA6NJL1 495 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 SLC22A31A6NKX4 558 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 CASQ2O14958 399 aaPredicted RBP15.12■□□□□ 0.01
VCP-202ENST00000417448 TBX1O43435 398 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 SPRY3O43610 288 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 TIMM8AO60220 97 aaPredicted RBP15.12■□□□□ 0.01
VCP-202ENST00000417448 GABRB1P18505 474 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 HSD11B1P28845 292 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 OTX1P32242 354 aaPredicted RBP15.12■□□□□ 0.01
VCP-202ENST00000417448 OPRL1P41146 370 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 MVKQ03426 396 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 SLC34A1Q06495 639 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 GLYATL3Q5SZD4 288 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 COLCA1Q6ZS62 124 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 FAM57BQ71RH2 274 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 SSX6Q7RTT6 188 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 APOL4Q9BPW4 351 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 C7orf69Q9H7B7 122 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 AMBNQ9NP70 447 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 ZNF319Q9P2F9 582 aa15.12■□□□□ 0.01
VCP-202ENST00000417448 PURGQ9UJV8 347 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms