RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MOGAT1Q96PD6 335 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 FBXL21Q9UKT6 434 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 LSM5Q9Y4Y9 91 aaKnown RBP13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 A0A1W2PQU0 124 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 K7EPK0 472 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 FGF17O60258 216 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 RAMP1O60894 148 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 KLF8O95600 359 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 CST4P01036 141 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 COL9A1P20849 921 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 RPL12P30050 165 aaKnown RBP13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 RHEBQ15382 184 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 ANKRD55Q3KP44 614 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM196Q5HYL7 178 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 ANGPTL5Q86XS5 388 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 FAM71E2Q8N5Q1 922 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR2I1PQ8NGU4 316 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 C8orf33Q9H7E9 229 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 LMAN1LQ9HAT1 526 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 STARD5Q9NSY2 213 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 POMT1Q9Y6A1 747 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 WIPF3A6NGB9 483 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 LMX1BO60663 402 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR6A2O95222 327 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 CD37P11049 281 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 PRPS1P60891 318 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 MFGE8Q08431 387 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 SGCGQ13326 291 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 SOHLH1Q5JUK2 328 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF385CQ66K41 422 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 FAM166AQ6J272 317 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 C19orf47Q8N9M1 422 aaKnown RBP13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR13C3Q8NGS6 347 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 ASB5Q8WWX0 329 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 FLVCR1Q9Y5Y0 555 aa13.13□□□□□ -0.31
NCKIPSD-204ENST00000416649 SEC14L6B5MCN3 397 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 PET100P0DJ07 73 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 CRABP1P29762 137 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 RNF4P78317 190 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 FAHD2BQ6P2I3 314 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 FAHD2AQ96GK7 314 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 TDRD6O60522 2096 aaKnown RBP13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 C11orf98E9PRG8 122 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 CYTIPO60759 359 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 CSTAP01040 98 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 KNG1P01042 644 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HKR1P10072 659 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HOXB2P14652 356 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM33P57088 247 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 BIKQ13323 160 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM184AQ6ZMB5 413 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 EXD3Q8N9H8 876 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 FAM212BQ9NTI7 297 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 STARD10Q9Y365 291 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HDGFL3Q9Y3E1 203 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 CXorf51AA0A1B0GTR3 108 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 RAB27BO00194 218 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 CYB5BO43169 146 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BKO60814 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 TRGC2P03986 189 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 SERPINA2P20848 420 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 CMPK1P30085 196 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 GNALP38405 381 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BDP58876 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 TAS2R31P59538 309 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BCP62807 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 RAB30Q15771 203 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST2H2BEQ16778 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 AKR1C8PQ5T2L2 129 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 RPUSD3Q6P087 351 aaKnown RBP13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 VN1R4Q7Z5H5 301 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 FANCMQ8IYD8 2048 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR52R1Q8NGF1 315 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BHQ93079 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BNQ99877 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 HIST1H2BMQ99879 126 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 G6PC3Q9BUM1 346 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 C5orf66Q9H5L9 145 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF576Q9H609 170 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM14AQ9Y6G1 99 aa13.12□□□□□ -0.31
NCKIPSD-204ENST00000416649 ARHGEF17Q96PE2 2063 aaPredicted RBP13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 LOC390937A0A1W2PQ73 354 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 STMND1H3BQB6 276 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 B3GALT2O43825 422 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 CXCL1P09341 107 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 COX5BP10606 129 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR2T2Q6IF00 324 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 SFTPA2Q8IWL1 248 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 KDM8Q8N371 416 aa13.11□□□□□ -0.31
NCKIPSD-204ENST00000416649 SUMF2Q8NBJ7 301 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms