RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 OR8B12Q8NGG6 310 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 OR10R2Q8NGX6 335 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 CASTOR1Q8WTX7 329 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ZNF471Q9BX82 626 aaPredicted RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 SLC7A5P2Q9GIP4 190 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 BANF2Q9H503 90 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 CHST11Q9NPF2 352 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 UPB1Q9UBR1 384 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 FBLN5Q9UBX5 448 aa8.72□□□□□ -1.01
SS18-203ENST00000415083 ASCC3Q8N3C0 2202 aaKnown RBP8.72□□□□□ -1.01
SS18-203ENST00000415083 IGKV1D-8A0A087WSZ0 117 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 METTL12A8MUP2 240 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 PGA4P0DJD7 388 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 PGA3P0DJD8 388 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 SNTB1Q13884 538 aaKnown RBP8.71□□□□□ -1.01
SS18-203ENST00000415083 RNASE10Q5GAN6 216 aaKnown RBP8.71□□□□□ -1.01
SS18-203ENST00000415083 DEGS2Q6QHC5 323 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 SYT13Q7L8C5 426 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 GKN2Q86XP6 184 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 LINC00518Q8N0U6 118 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 THRSPQ92748 146 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 MVB12AQ96EY5 273 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 OR10C1Q96KK4 312 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 PDCD10Q9BUL8 212 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 ZNF768Q9H5H4 540 aaKnown RBP8.71□□□□□ -1.01
SS18-203ENST00000415083 KIAA1549Q9HCM3 1950 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 NCKAP5O14513 1909 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 CEACAM18A8MTB9 384 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 OR2T1O43869 369 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 DKK1O94907 266 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 BPNT1O95861 308 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 H2BFMP0C1H6 154 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 IL13RA1P78552 427 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 SMAD4Q13485 552 aaKnown RBP8.71□□□□□ -1.01
SS18-203ENST00000415083 PAN3Q58A45 887 aaKnown RBP8.71□□□□□ -1.01
SS18-203ENST00000415083 TMEM244Q5VVB8 128 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 KCTD9Q7L273 389 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 NKAIN3Q8N8D7 197 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 PLPP5Q8NEB5 264 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 ELP5Q8TE02 316 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 DAZLQ92904 295 aaKnown RBP8.71□□□□□ -1.01
SS18-203ENST00000415083 GPR132Q9UNW8 380 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 CSAG2Q9Y5P2 127 aa8.71□□□□□ -1.01
SS18-203ENST00000415083 MEGF11A6BM72 1044 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 NPIPB13A6NJU9 1138 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 NPIPB4C9JG80 1138 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 RER1O15258 196 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 TRAF3IP2O43734 574 aaPredicted RBP8.71□□□□□ -1.02
SS18-203ENST00000415083 DUS4LO95620 317 aaKnown RBP8.71□□□□□ -1.02
SS18-203ENST00000415083 CD27P26842 260 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 NXPH1P58417 271 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 MYBPHQ13203 477 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 PHYHD1Q5SRE7 291 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 PDSS1Q5T2R2 415 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 LPCAT3Q6P1A2 487 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 ZNF704Q6ZNC4 412 aaPredicted RBP8.71□□□□□ -1.02
SS18-203ENST00000415083 SLC29A4Q7RTT9 530 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 ANKRD37Q7Z713 158 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 CHST4Q8NCG5 386 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 CLRN3Q8NCR9 226 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 OR13G1Q8NGZ3 307 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 OR51F2Q8NH61 342 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 AKIRIN1Q9H9L7 192 aaPredicted RBP8.71□□□□□ -1.02
SS18-203ENST00000415083 SLC2A4RGQ9NR83 387 aa8.71□□□□□ -1.02
SS18-203ENST00000415083 A0A1W2PNR3 127 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 NPIPA5E9PKD4 350 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 CDC14BO60729 498 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 ZNF823P16415 610 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 CSNK1EP49674 416 aaKnown RBP8.7□□□□□ -1.02
SS18-203ENST00000415083 TLE3Q04726 772 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 MEF2DQ14814 521 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 HFEQ30201 348 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 PLPPR5Q32ZL2 321 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 DRAM2Q6UX65 266 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 LHFPL1Q86WI0 220 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 CBLN2Q8IUK8 224 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 OR10Z1Q8NGY1 313 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 OR6S1Q8NH40 331 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 STOML3Q8TAV4 291 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 MAFIPQ8WZ33 124 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 ZDHHC12Q96GR4 267 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 LIN37Q96GY3 246 aaPredicted RBP8.7□□□□□ -1.02
SS18-203ENST00000415083 PRRT1Q99946 306 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.7□□□□□ -1.02
SS18-203ENST00000415083 NKX6-2Q9C056 277 aaPredicted RBP8.7□□□□□ -1.02
SS18-203ENST00000415083 GLS2Q9UI32 602 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 NPIPA1Q9UND3 350 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 CABIN1Q9Y6J0 2220 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 TEX13DA0A0J9YY54 714 aaPredicted RBP8.7□□□□□ -1.02
SS18-203ENST00000415083 A0A1B0GX78 115 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 A0A1W2PNV4 684 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 DISC1C4P0D8 188 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 MFNGO00587 321 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 SYT7O43581 403 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 PIAS2O75928 621 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 ATG12O94817 140 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 LYL1P12980 280 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 AGTR1P30556 359 aa8.7□□□□□ -1.02
SS18-203ENST00000415083 NPY4RP50391 375 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms