RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SPSB4Q96A44 273 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 TMEM106BQ9NUM4 274 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 LRP12Q9Y561 859 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 ACANP16112 2415 aa12.47□□□□□ -0.41
CHD1-202ENST00000414220 LOC100289279A0A1B0GTE1 492 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 ISPDA4D126 451 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 KRT8P05787 483 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 IGHV4-31P0DP07 118 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 GNALP38405 381 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 HCCSP53701 268 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 CXCR4P61073 352 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 SNRPGP62308 76 aaKnown RBP12.46□□□□□ -0.41
CHD1-202ENST00000414220 ROM1Q03395 351 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 EGR3Q06889 387 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 TRIP10Q15642 601 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 LINC01356Q8N9X3 169 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 OR10AD1Q8NGE0 317 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 OR8S1Q8NH09 359 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 SGK3Q96BR1 496 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 MRPL48Q96GC5 212 aaKnown RBP12.46□□□□□ -0.41
CHD1-202ENST00000414220 MEGF10Q96KG7 1140 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 GAL3ST1Q99999 423 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 APOL4Q9BPW4 351 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 ADAT1Q9BUB4 502 aaKnown RBP12.46□□□□□ -0.41
CHD1-202ENST00000414220 NARFLQ9H6Q4 476 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 ADGRL4Q9HBW9 690 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 ABCB9Q9NP78 766 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 C14orf119Q9NWQ9 140 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 TREM2Q9NZC2 230 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 PCDHB10Q9UN67 800 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 PCDHGB1Q9Y5G3 927 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 NPTNQ9Y639 398 aa12.46□□□□□ -0.41
CHD1-202ENST00000414220 LOC100130705A0A1B0GUX0 176 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 B4DSR2 109 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 LMX1BO60663 402 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 TGFAP01135 160 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 CA6P23280 308 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 ACTC1P68032 377 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 ACTA1P68133 377 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 OCLNQ16625 522 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 SLC25A30Q5SVS4 291 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 C6orf52Q5T4I8 152 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 AVPI1Q5T686 147 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 COMMD2Q86X83 199 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 SPICQ8N5J4 248 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 PACRGLQ8N7B6 248 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 PLPP7Q8NBV4 271 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 OR56B2PQ8NGI1 322 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 CLDND2Q8NHS1 167 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 SLC29A1Q99808 456 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 VCXQ9H320 206 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 MOB1AQ9H8S9 216 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 GCM1Q9NP62 436 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 SMPD3Q9NY59 655 aaPredicted RBP12.45□□□□□ -0.42
CHD1-202ENST00000414220 KLHDC2Q9Y2U9 406 aa12.45□□□□□ -0.42
CHD1-202ENST00000414220 ANXA2P2A6NMY6 339 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 INAFM1C9JVW0 142 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 F5H5P2 479 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 PSMD9O00233 223 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
CHD1-202ENST00000414220 HLA-DPB1P04440 258 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 ATP6V1B1P15313 513 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 ZNF16P17020 682 aaPredicted RBP12.44□□□□□ -0.42
CHD1-202ENST00000414220 HNF1AP20823 631 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 CD200P41217 278 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 MTNR1AP48039 350 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 MMP16P51512 607 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 FAM3AP98173 230 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 RCN1Q15293 331 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 PLEKHG7Q6ZR37 379 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 PRSS45Q7RTY3 260 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 FAM220AQ7Z4H9 259 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 MUC20Q8N307 709 aaPredicted RBP12.44□□□□□ -0.42
CHD1-202ENST00000414220 KLHL36Q8N4N3 616 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 OR10H4Q8NGA5 316 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 HIST1H2AAQ96QV6 131 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 LPAR3Q9UBY5 353 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 GTF2A1LQ9UNN4 478 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 CACNG2Q9Y698 323 aa12.44□□□□□ -0.42
CHD1-202ENST00000414220 TEP1Q99973 2627 aaKnown RBP12.43□□□□□ -0.42
CHD1-202ENST00000414220 A0A0U1RQV5 110 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 hCG_38984A0A1B0GV85 526 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 A0A1B0GWJ7 208 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 LOC110117498-PIK3R3F6TDL0 507 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 H0YL77 283 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 MLNRO43193 412 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 SULT1C4O75897 302 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 GATA4P43694 442 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 MAP2K3P46734 347 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 GSK3AP49840 483 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 PRSS12P56730 875 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 IL5RAQ01344 420 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 KRTAP1-1Q07627 177 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 ZNF181Q2M3W8 571 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 TTC23Q5W5X9 447 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 THAP5Q7Z6K1 395 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 MOGAT3Q86VF5 341 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms