RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 NEU3Q9UQ49 428 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 POLR2AP24928 1970 aaKnown RBP15.52■□□□□ 0.08
PHRF1-202ENST00000413872 SHANK3Q9BYB0 1731 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 A0A0U1RQK1 487 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 FADS1O60427 444 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 SSTR2P30874 369 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 FABP5Q01469 135 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 ASAH1Q13510 395 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 KCNIP4Q6PIL6 250 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 TRILQ7L0X0 811 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 MSRB3Q8IXL7 192 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 MGMTP16455 207 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 SERPINF1P36955 418 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 GCNT2Q8N0V5 402 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 RNF141Q8WVD5 230 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 FAM96BQ9Y3D0 163 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 FLVCR1Q9Y5Y0 555 aa15.52■□□□□ 0.07
PHRF1-202ENST00000413872 CD300LDQ6UXZ3 194 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 HIF1ANQ9NWT6 349 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 LRP12Q9Y561 859 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 HMGA2P52926 109 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 RAC3P60763 192 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 CDK5Q00535 292 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 FCN2Q15485 313 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 HMGN3Q15651 99 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 TMEM108Q6UXF1 575 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 SLC36A1Q7Z2H8 476 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 OR10R2Q8NGX6 335 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 CA5BP1Q8WTZ4 195 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 PFDN5Q99471 154 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 ACTL6AO96019 429 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 TRAPPC2P0DI81 140 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 TRAPPC2BP0DI82 140 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 B4E171 279 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 K7EQM0 130 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 WDR1O75083 606 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 CDAP32320 146 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 TSPAN7P41732 249 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 DYRK1AQ13627 763 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 FAM213BQ8TBF2 198 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 MRPS24Q96EL2 167 aaKnown RBP15.51■□□□□ 0.07
PHRF1-202ENST00000413872 PLA2G12AQ9BZM1 189 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 SLC23A1Q9UHI7 598 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 IGHV5-10-1A0A0J9YXX1 117 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 SLC17A2O00624 439 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 ZNF354AO60765 605 aaPredicted RBP15.51■□□□□ 0.07
PHRF1-202ENST00000413872 GNB2P62879 340 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 LRRC10Q5BKY1 277 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 OR13C8Q8NGS7 320 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 FBXO17Q96EF6 278 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 RASL10BQ96S79 203 aa15.51■□□□□ 0.07
PHRF1-202ENST00000413872 FER1L6Q2WGJ9 1857 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 NPIPB8E9PQR5 432 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 GMDSO60547 372 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 SFTPCP11686 197 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 FAM74A1Q5RGS3 127 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 ANKRD34AQ69YU3 496 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 Q6ZRG5 221 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 TRGV10A0A0A0MS01 117 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 SHISA8B8ZZ34 492 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 GALR2O43603 387 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-202ENST00000413872 CLINT1Q14677 625 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 GPR32P1Q8NGA4 272 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 OR4Q3Q8NH05 313 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 HPSE2Q8WWQ2 592 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 SPACA5Q96QH8 159 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 SF3B5Q9BWJ5 86 aaKnown RBP15.5■□□□□ 0.07
PHRF1-202ENST00000413872 ING1Q9UK53 422 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-202ENST00000413872 MAGEB4O15481 346 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-202ENST00000413872 FABP7O15540 132 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 HOXB3P14651 431 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-202ENST00000413872 FAHP16930 419 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 DHODHQ02127 395 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 BATF2Q8N1L9 274 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 OR13G1Q8NGZ3 307 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 NTN4Q9HB63 628 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 FBXO8Q9NRD0 319 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 SIRT3Q9NTG7 399 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-202ENST00000413872 TRAPPC4Q9Y296 219 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 ST8SIA5O15466 376 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 NDUFB3O43676 98 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 C1QAP02745 245 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 IGHV4-34P06331 123 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 CCL4P13236 92 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 VASH2Q86V25 355 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 NPEPL1Q8NDH3 523 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 CMTM2Q8TAZ6 248 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 GPX8Q8TED1 209 aa15.5■□□□□ 0.07
PHRF1-202ENST00000413872 S100A11P31949 105 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 EIF4EBP2Q13542 120 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 USF2Q15853 346 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 CMTM3Q96MX0 182 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 ESRP2Q9H6T0 727 aaKnown RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 SPINT1O43278 529 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 OR5H8P0DN80 308 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 GALP22466 123 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 EVX1P49640 407 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 PCBP3P57721 371 aaKnown RBP15.49■□□□□ 0.07
PHRF1-202ENST00000413872 MC2RQ01718 297 aa15.49■□□□□ 0.07
PHRF1-202ENST00000413872 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms