RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 EMC7Q9NPA0 242 aa14.99□□□□□ -0.01
PTPRC-206ENST00000413409 SLC17A5Q9NRA2 495 aa14.99□□□□□ -0.01
PTPRC-206ENST00000413409 B4GALT7Q9UBV7 327 aa14.99□□□□□ -0.01
PTPRC-206ENST00000413409 FOXD3Q9UJU5 478 aaPredicted RBP14.99□□□□□ -0.01
PTPRC-206ENST00000413409 CLEC4AQ9UMR7 237 aa14.99□□□□□ -0.01
PTPRC-206ENST00000413409 CACNG2Q9Y698 323 aa14.99□□□□□ -0.01
PTPRC-206ENST00000413409 MEIOCA2RUB1 952 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 LANCL1O43813 399 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 NEURL1O76050 574 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 MAS1P04201 325 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 MSR1P21757 451 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 GDF1P27539 372 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 CHRNB4P30926 498 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 TPTEP56180 551 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 GRB2P62993 217 aaKnown RBP14.98□□□□□ -0.01
PTPRC-206ENST00000413409 GPR176Q14439 515 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 GLT8D1Q68CQ7 371 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 ASPHD2Q6ICH7 369 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 FAM166AQ6J272 317 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 RPRMLQ8N4K4 120 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 DNAAF1Q8NEP3 725 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 OR13C3Q8NGS6 347 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 OR6N1Q8NGY5 312 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 SYNPRQ8TBG9 265 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 CREB3L1Q96BA8 519 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 S100A16Q96FQ6 103 aaKnown RBP14.98□□□□□ -0.01
PTPRC-206ENST00000413409 SCMH1Q96GD3 660 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 UCN2Q96RP3 112 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 ALPK2Q86TB3 2170 aa14.98□□□□□ -0.01
PTPRC-206ENST00000413409 A0A1B0GVC2 190 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 A6NIN4 97 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 CENPXA8MT69 81 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 GABARAPH6UMI1 98 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 EIF1AYO14602 144 aaKnown RBP14.97□□□□□ -0.01
PTPRC-206ENST00000413409 ACSM4P0C7M7 580 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 SLC6A1P30531 599 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 HOXC12P31275 282 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 CD96P40200 585 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 CAPZA1P52907 286 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 GFRA1P56159 465 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 DGCR2P98153 550 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 DYRK1AQ13627 763 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 SLC36A2Q495M3 483 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 PDSS1Q5T2R2 415 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 SPINK14Q6IE38 97 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 KRTAP1-3Q8IUG1 177 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 C20orf196Q8IYI0 205 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 ZIC4Q8N9L1 334 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 OR2M7Q8NG81 312 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 ZNF385AQ96PM9 386 aaKnown RBP14.97□□□□□ -0.01
PTPRC-206ENST00000413409 MARVELD1Q9BSK0 173 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 PBOV1Q9GZY1 135 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 NELFAQ9H3P2 528 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 ZNF703Q9H7S9 590 aaPredicted RBP14.97□□□□□ -0.01
PTPRC-206ENST00000413409 PNRC2Q9NPJ4 139 aaKnown RBP14.97□□□□□ -0.01
PTPRC-206ENST00000413409 DDX28Q9NUL7 540 aaKnown RBP14.97□□□□□ -0.01
PTPRC-206ENST00000413409 TAS2R4Q9NYW5 299 aa14.97□□□□□ -0.01
PTPRC-206ENST00000413409 IGHV3-15A0A0B4J1V0 119 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 LOC100289279A0A1B0GTE1 492 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 PINLYPA6NC86 204 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 HMX3A6NHT5 357 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 TFECO14948 347 aaPredicted RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 DHHO43323 396 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 ORC5O43913 435 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 TTRP02766 147 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 HPNP05981 417 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 RFPL3SP0C7P2 107 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 CTSSP25774 331 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 HSD11B1P28845 292 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 CDAP32320 146 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 GUCA1AP43080 201 aaPredicted RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 EIF1AXP47813 144 aaKnown RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 EIF2B2P49770 351 aaKnown RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 CLDN12P56749 244 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 BTG1P62324 171 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 CD300CQ08708 224 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 PLA1AQ53H76 456 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 TMEM69Q5SWH9 247 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 RSBN1Q5VWQ0 802 aaPredicted RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 TOMM5Q8N4H5 51 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 DTX3Q8N9I9 347 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 OR6M1Q8NGM8 313 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 PPP1R14AQ96A00 147 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 CLEC4MQ9H2X3 399 aaPredicted RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 ASH2LQ9UBL3 628 aa14.96□□□□□ -0.01
PTPRC-206ENST00000413409 RBMX2Q9Y388 322 aaKnown RBP14.96□□□□□ -0.01
PTPRC-206ENST00000413409 LOC390937A0A1W2PQ73 354 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 ZNF716A6NP11 495 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 P2RY10O00398 339 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 TPOP07202 933 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 HLA-DMAP28067 261 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 BTCP35070 178 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 PTH2RP49190 550 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 ZNF84P51523 738 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 CARD18P57730 90 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 HIST1H3AP68431 136 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 KLF9Q13886 244 aaPredicted RBP14.95□□□□□ -0.02
PTPRC-206ENST00000413409 TAF13Q15543 124 aa14.95□□□□□ -0.02
PTPRC-206ENST00000413409 OR1C1Q15619 314 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms