RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
MCF2L-211ENST00000413354 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 AP4S1Q9Y587 144 aa13.21□□□□□ -0.29
MCF2L-211ENST00000413354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-211ENST00000413354 TCF21O43680 179 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 H2BFMP0C1H6 154 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 OPRL1P41146 370 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 LCN2P80188 198 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 SNCBQ16143 134 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 ESCO2Q56NI9 601 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-211ENST00000413354 OR56B2PQ8NGI1 322 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 ZNF420Q8TAQ5 688 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-211ENST00000413354 SPSB4Q96A44 273 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 DUS3LQ96G46 650 aaKnown RBP13.2□□□□□ -0.3
MCF2L-211ENST00000413354 OR10A2Q9H208 303 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 RGCCQ9H4X1 137 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 METTL17Q9H7H0 456 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-211ENST00000413354 FN3KRPQ9HA64 309 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 KRT84Q9NSB2 600 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 TVP23BQ9NYZ1 205 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 LRCH1Q9Y2L9 728 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 N6AMT1Q9Y5N5 214 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 CUBNO60494 3623 aa13.2□□□□□ -0.3
MCF2L-211ENST00000413354 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 A8MXK9 166 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 F5H0A9 414 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-211ENST00000413354 G3V2T6 193 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 SELENOFO60613 162 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 CYB5R3P00387 301 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-211ENST00000413354 CA6P23280 308 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 DAPP51397 102 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 ZNF121P58317 390 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-211ENST00000413354 MAB21L1Q13394 359 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 TMEM236Q5W0B7 351 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 C1QL2Q7Z5L3 287 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 ZDHHC13Q8IUH4 622 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 PLPP7Q8NBV4 271 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 THEM6Q8WUY1 208 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 TMPRSS13Q9BYE2 586 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 GABARAPL1Q9H0R8 117 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 NIPAL2Q9H841 368 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 DNAJC27Q9NZQ0 273 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 MIOXQ9UGB7 285 aa13.19□□□□□ -0.3
MCF2L-211ENST00000413354 POLR3KQ9Y2Y1 108 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-211ENST00000413354 FBN1P35555 2871 aaKnown RBP13.18□□□□□ -0.3
MCF2L-211ENST00000413354 A0A0A6YYJ9 748 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 IGHV3-64DA0A0J9YX35 117 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 ANKRD30BLA7E2S9 258 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 RPS2P15880 293 aaKnown RBP13.18□□□□□ -0.3
MCF2L-211ENST00000413354 SLC2A5P22732 501 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 NAA10P41227 235 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-211ENST00000413354 HNRNPA0Q13151 305 aaKnown RBP13.18□□□□□ -0.3
MCF2L-211ENST00000413354 APOFQ13790 326 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 FAM57BQ71RH2 274 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 NLRC3Q7RTR2 1065 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 FTMTQ8N4E7 242 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 BBS1Q8NFJ9 593 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 REEP6Q96HR9 211 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 PGAM5Q96HS1 289 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 YIPF3Q9GZM5 350 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 C14orf119Q9NWQ9 140 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 OR5V1Q9UGF6 321 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 LAMP5Q9UJQ1 280 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 PPIAL4AQ9Y536 164 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 SVEP1Q4LDE5 3571 aa13.18□□□□□ -0.3
MCF2L-211ENST00000413354 LOC105371242A0A075B767 164 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 C5orf63A6NC05 138 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 FAM20BO75063 409 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 PTBP3O95758 552 aaKnown RBP13.17□□□□□ -0.3
MCF2L-211ENST00000413354 PSMA6P60900 246 aaKnown RBP13.17□□□□□ -0.3
MCF2L-211ENST00000413354 PTGES3Q15185 160 aaKnown RBP13.17□□□□□ -0.3
MCF2L-211ENST00000413354 KCNJ8Q15842 424 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 ZNF404Q494X3 552 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 PRAMEF6Q5VXH4 476 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-211ENST00000413354 SLC16A9Q7RTY1 509 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 PHC2Q8IXK0 858 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 CSNK2A3Q8NEV1 391 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 NEIL1Q96FI4 390 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-211ENST00000413354 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 AMELYQ99218 206 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 TRIM36Q9NQ86 728 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 UFSP2Q9NUQ7 469 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
MCF2L-211ENST00000413354 hCG_38984A0A1B0GV85 526 aa13.16□□□□□ -0.3
MCF2L-211ENST00000413354 ALOX5APP20292 161 aa13.16□□□□□ -0.3
MCF2L-211ENST00000413354 EPHA1P21709 976 aa13.16□□□□□ -0.3
MCF2L-211ENST00000413354 ANOS1P23352 680 aa13.16□□□□□ -0.3
MCF2L-211ENST00000413354 ZFP36P26651 326 aaKnown RBP13.16□□□□□ -0.3
MCF2L-211ENST00000413354 PMELP40967 661 aa13.16□□□□□ -0.3
MCF2L-211ENST00000413354 FAM3AP98173 230 aa13.16□□□□□ -0.3
MCF2L-211ENST00000413354 KRTAP24-1Q3LI83 254 aa13.16□□□□□ -0.3
MCF2L-211ENST00000413354 KDM4DQ6B0I6 523 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms