RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 LCN1P1Q5VSP4 162 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 LRRN1Q6UXK5 716 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 PRSS45Q7RTY3 260 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 OR56B2PQ8NGI1 322 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 DVL3Q92997 716 aaPredicted RBP15.87■□□□□ 0.13
TRIM56-202ENST00000412507 SGK3Q96BR1 496 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 SP140LQ9H930 580 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 ZNF319Q9P2F9 582 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 ENOPH1Q9UHY7 261 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 LAMP5Q9UJQ1 280 aa15.87■□□□□ 0.13
TRIM56-202ENST00000412507 H3BNX3 289 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 CYB5R3P00387 301 aaPredicted RBP15.86■□□□□ 0.13
TRIM56-202ENST00000412507 ANPEPP15144 967 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 SRD5A1P18405 259 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 RAD23AP54725 363 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 BTG1P62324 171 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 EFNB1P98172 346 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 ZMYND11Q15326 602 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 TMEM163Q8TC26 289 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 SPSB4Q96A44 273 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 REEP6Q96HR9 211 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 PGAM5Q96HS1 289 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 IL4I1Q96RQ9 567 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 OSBPL10Q9BXB5 764 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 YIPF3Q9GZM5 350 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 RIBC2Q9H4K1 309 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 OPA3Q9H6K4 179 aa15.86■□□□□ 0.13
TRIM56-202ENST00000412507 H2AFY2Q9P0M6 372 aaPredicted RBP15.86■□□□□ 0.13
TRIM56-202ENST00000412507 IFNL4K9M1U5 179 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 PLPP2O43688 288 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 ZNF205O95201 554 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 IFNA2P01563 188 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 PMELP40967 661 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 CD200P41217 278 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 FAM3AP98173 230 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 GFOD2Q3B7J2 385 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 AADACL4Q5VUY2 407 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 PRAMEF6Q5VXH4 476 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 NXNL2Q5VZ03 156 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 ZFP1Q6P2D0 407 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 MEPCEQ7L2J0 689 aaKnown RBP15.85■□□□□ 0.13
TRIM56-202ENST00000412507 KRT77Q7Z794 578 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 LRRC28Q86X40 367 aaPredicted RBP15.85■□□□□ 0.13
TRIM56-202ENST00000412507 OR52H1Q8NGJ2 320 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 RBM4BQ9BQ04 359 aaKnown RBP15.85■□□□□ 0.13
TRIM56-202ENST00000412507 ADAT1Q9BUB4 502 aaKnown RBP15.85■□□□□ 0.13
TRIM56-202ENST00000412507 SLC22A4Q9H015 551 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 OR10A2Q9H208 303 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 MRPL15Q9P015 296 aaKnown RBP15.85■□□□□ 0.13
TRIM56-202ENST00000412507 PCDHB10Q9UN67 800 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 LRP12Q9Y561 859 aa15.85■□□□□ 0.13
TRIM56-202ENST00000412507 COL6A5A8TX70 2615 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 TRAV20A0A0B4J274 112 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 ERICH4A6NGS2 130 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 PSMD9O00233 223 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 GMDSO60547 372 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 PCMT1P22061 227 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 GATA4P43694 442 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 TMEM155Q4W5P6 130 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 CELF2-AS1Q8N7Q2 184 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 CNN2Q99439 309 aaKnown RBP15.84■□□□□ 0.13
TRIM56-202ENST00000412507 GABARAPL3Q9BY60 117 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 TTTY10Q9BZA0 68 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 UFSP2Q9NUQ7 469 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 COPS3Q9UNS2 423 aa15.84■□□□□ 0.13
TRIM56-202ENST00000412507 NOP16Q9Y3C1 178 aaKnown RBP15.84■□□□□ 0.13
TRIM56-202ENST00000412507 FBN1P35555 2871 aaKnown RBP15.84■□□□□ 0.13
TRIM56-202ENST00000412507 hCG_38984A0A1B0GV85 526 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 LRRC30A6NM36 301 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 DDOSTP39656 456 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 MDH2P40926 338 aaKnown RBP15.83■□□□□ 0.12
TRIM56-202ENST00000412507 MPPED2Q15777 294 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 ZNF181Q2M3W8 571 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 FAM201AQ5SY85 155 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 KCTD18Q6PI47 426 aaPredicted RBP15.83■□□□□ 0.12
TRIM56-202ENST00000412507 KLHL36Q8N4N3 616 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 SPICQ8N5J4 248 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 NIPAL2Q9H841 368 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 PATZ1Q9HBE1 687 aaKnown RBP15.83■□□□□ 0.12
TRIM56-202ENST00000412507 G6PC2Q9NQR9 355 aa15.83■□□□□ 0.12
TRIM56-202ENST00000412507 SLC22A31A6NKX4 558 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 ANKRD30BLA7E2S9 258 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 PRR32B1ATL7 298 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 FAM20BO75063 409 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 SRP14P37108 136 aaKnown RBP15.82■□□□□ 0.12
TRIM56-202ENST00000412507 GSK3AP49840 483 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 PSMA6P60900 246 aaKnown RBP15.82■□□□□ 0.12
TRIM56-202ENST00000412507 LCN2P80188 198 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 FAHD2BQ6P2I3 314 aaPredicted RBP15.82■□□□□ 0.12
TRIM56-202ENST00000412507 GID4Q8IVV7 300 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 C1orf87Q8N0U7 546 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 MUC20Q8N307 709 aaPredicted RBP15.82■□□□□ 0.12
TRIM56-202ENST00000412507 RFLNBQ8N5W9 214 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 OR8B12Q8NGG6 310 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 ERGIC1Q969X5 290 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 FAHD2AQ96GK7 314 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 MROQ9BYG7 248 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 TMEM165Q9HC07 324 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 TMEM14AQ9Y6G1 99 aa15.82■□□□□ 0.12
TRIM56-202ENST00000412507 EI24O14681 340 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms