RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 CNTD2Q9H8S5 307 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 GPR84Q9NQS5 396 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 CGGBP1Q9UFW8 167 aaPredicted RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF222Q9UK12 451 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 RAXQ9Y2V3 346 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 SDK2Q58EX2 2172 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 STMND1H3BQB6 276 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 H3BSH0 61 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 RRP8O43159 456 aaKnown RBP11.96□□□□□ -0.5
LIMS1-205ENST00000410093 CYTIPO60759 359 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 WDPCPO95876 746 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 HPNP05981 417 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 POU3F2P20265 443 aaPredicted RBP11.96□□□□□ -0.5
LIMS1-205ENST00000410093 PRKXP51817 358 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 RTP5Q14D33 572 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 RAB35Q15286 201 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 LINC00303Q3SY05 128 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 DRAM2Q6UX65 266 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF767PQ75MW2 155 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF627Q7L945 461 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 COMMD2Q86X83 199 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 MEIOBQ8N635 442 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 OR11H7Q8NGC8 314 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 OR4C16Q8NGL9 310 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 ADAMTS17Q8TE56 1095 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 AQP3Q92482 292 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 DACT3Q96B18 629 aaPredicted RBP11.96□□□□□ -0.5
LIMS1-205ENST00000410093 ADAT3Q96EY9 351 aaPredicted RBP11.96□□□□□ -0.5
LIMS1-205ENST00000410093 RBM24Q9BX46 236 aaKnown RBP11.96□□□□□ -0.5
LIMS1-205ENST00000410093 NPDC1Q9NQX5 325 aaPredicted RBP11.96□□□□□ -0.5
LIMS1-205ENST00000410093 V9GYS6 101 aa11.96□□□□□ -0.5
LIMS1-205ENST00000410093 IGF2RP11717 2491 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF716A6NP11 495 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 TMEM14DPA8MWL7 114 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 DHRS3O75911 302 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 CD74P04233 296 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 PRF1P14222 555 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 GDF1P27539 372 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 VEGFCP49767 419 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 GFRA1P56159 465 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 QRFPP83859 136 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 SF3B4Q15427 424 aaKnown RBP eCLIP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 B3GNTL1Q67FW5 361 aaPredicted RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 RTL6Q6ICC9 239 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 MTFR2Q6P444 385 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 SEZ6L2Q6UXD5 910 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 YRDCQ86U90 279 aaKnown RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 GABRG1Q8N1C3 465 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 OR52N4Q8NGI2 321 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 OR14K1Q8NGZ2 314 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 UCN2Q96RP3 112 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 URM1Q9BTM9 101 aaKnown RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 SRXN1Q9BYN0 137 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF436Q9C0F3 470 aaPredicted RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 OR10A2Q9H208 303 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 OR10A4Q9H209 315 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 RGCCQ9H4X1 137 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 RNF122Q9H9V4 155 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 PARPBPQ9NWS1 579 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 SLC2A8Q9NY64 477 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 MRPL15Q9P015 296 aaKnown RBP11.95□□□□□ -0.5
LIMS1-205ENST00000410093 ATPIF1Q9UII2 106 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 AKAP13Q12802 2813 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 WDFY3Q8IZQ1 3526 aa11.95□□□□□ -0.5
LIMS1-205ENST00000410093 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 G3V3Y1 287 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 FABP7O15540 132 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 TRAPPC6AO75865 159 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF24P17028 368 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 CD96P40200 585 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 FOXO1Q12778 655 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 PLA2G7Q13093 441 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 PNLIPRP3Q17RR3 467 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 DCAF10Q5QP82 559 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 AWAT2Q6E213 333 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 FAM57BQ71RH2 274 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF584Q8IVC4 421 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 OR2M7Q8NG81 312 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 OR10D3Q8NH80 312 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 GCDHQ92947 438 aaPredicted RBP11.94□□□□□ -0.5
LIMS1-205ENST00000410093 PRRT1Q99946 306 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 GINS4Q9BRT9 223 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 CST11Q9H112 138 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 NKIRAS2Q9NYR9 191 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 FOXJ2Q9P0K8 574 aa11.94□□□□□ -0.5
LIMS1-205ENST00000410093 DOCK10Q96BY6 2186 aa11.93□□□□□ -0.5
LIMS1-205ENST00000410093 USP24Q9UPU5 2620 aa11.93□□□□□ -0.5
LIMS1-205ENST00000410093 ZNF736B4DX44 427 aaPredicted RBP11.93□□□□□ -0.5
LIMS1-205ENST00000410093 M0R135 149 aa11.93□□□□□ -0.5
LIMS1-205ENST00000410093 RAB27BO00194 218 aa11.93□□□□□ -0.5
LIMS1-205ENST00000410093 RGS11O94810 467 aa11.93□□□□□ -0.5
LIMS1-205ENST00000410093 KDM4BO94953 1096 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms