RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 IGHV3-9P01782 118 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 CD2P06729 351 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ITGA5P08648 1049 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SLC2A2P11168 524 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 MPGP29372 298 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 EVX1P49640 407 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 PRKXP51817 358 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SF3B4Q15427 424 aaKnown RBP eCLIP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF181Q2M3W8 571 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 LINC00303Q3SY05 128 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF774Q6NX45 483 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 LRRC28Q86X40 367 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 OR1K1Q8NGR3 316 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 OR6K3Q8NGY3 331 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SPTSSAQ969W0 71 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF799Q96GE5 643 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SRRQ9GZT4 340 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 CYSLTR2Q9NS75 346 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 COMMD3Q9UBI1 195 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 ADAM30Q9UKF2 790 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SPATA2Q9UM82 520 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 RHBDD3Q9Y3P4 386 aa4.82□□□□□ -1.64
EPHA4-202ENST00000409854 SPENQ96T58 3664 aaKnown RBP4.82□□□□□ -1.64
EPHA4-202ENST00000409854 TRIM77I1YAP6 450 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 SYT7O43581 403 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 LMX1BO60663 402 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 WDR1O75083 606 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 CALCBP10092 127 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 GABRA1P14867 456 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 PTGER4P35408 488 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 DDOSTP39656 456 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 KIR2DL2P43627 348 aaPredicted RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ID4P47928 161 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 HGFACQ04756 655 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 SLC36A2Q495M3 483 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ANKRD16Q6P6B7 361 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 SEM1Q6ZVN7 128 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 DOK3Q7L591 496 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 OR1J2Q8NGS2 313 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 TRMT10AQ8TBZ6 339 aaKnown RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 OR51E1Q8TCB6 317 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 LYZL4Q96KX0 146 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 C12orf49Q9H741 205 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 PPP1R3EQ9H7J1 279 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 TAS2R4Q9NYW5 299 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 V9GYS6 101 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 PTPRZ1P23471 2315 aaPredicted RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 A0A1B0GVI7 797 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 C5orf63A6NC05 138 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF503-AS2A6NEH8 195 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ZNHIT1O43257 154 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 CRHP06850 196 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 DBHP09172 617 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 SLC2A1P11166 492 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ELK1P19419 428 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 COX5AP20674 150 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 GALK2Q01415 458 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 TBRG1Q3YBR2 411 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 RTL6Q6ICC9 239 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 CNIH2Q6PI25 160 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 XKRXQ6PP77 449 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 FAM180AQ6UWF9 173 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 COLCA1Q6ZS62 124 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 FAM57BQ71RH2 274 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 NAA40Q86UY6 237 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 OR52H1Q8NGJ2 320 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 OR5M9Q8NGP3 310 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 OR5H6Q8NGV6 325 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 OR14K1Q8NGZ2 314 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 BCL2L2Q92843 193 aaPredicted RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ADAT3Q96EY9 351 aaPredicted RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 DIRAS2Q96HU8 199 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF75AQ96N20 296 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 BRD7Q9NPI1 651 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 GPR84Q9NQS5 396 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 B3GNT2Q9NY97 397 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 FAM215AQ9Y5M1 114 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ISPDA4D126 451 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 DBX1A6NMT0 343 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 DHRS7CA6NNS2 312 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 FAM25AB3EWG3 89 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 FAM25CB3EWG5 89 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 FAM25GB3EWG6 89 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 MAGEB3O15480 346 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 TNFSF13O75888 250 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 UBL3O95164 117 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 BPNT1O95861 308 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 CGAP01215 116 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 APOA1P02647 267 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 EIF4EP06730 217 aaKnown RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ANXA2P07355 339 aaKnown RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 PATE4P0C8F1 98 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 HTR5AP47898 357 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 TPTEP56180 551 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 EIF2S3LQ2VIR3 472 aaKnown RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 PABPC1L2AQ5JQF8 200 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 SFRP5Q5T4F7 317 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 Q6ZT83 130 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 LYSMD2Q8IV50 215 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 SERPINA12Q8IW75 414 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms