RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FAHP16930 419 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 CCL1P22362 96 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF92Q03936 586 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 LINC00299Q6ZSB3 139 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 DPPA2Q7Z7J5 298 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 PARP16Q8N5Y8 322 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 OR5D14Q8NGL3 314 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 OR5H6Q8NGV6 325 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 POM121L2Q96KW2 1035 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 LIN7BQ9HAP6 207 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 PIGLQ9Y2B2 252 aa10.81□□□□□ -0.68
CHMP3-204ENST00000409727 RP1L1Q8IWN7 2480 aaPredicted RBP10.8□□□□□ -0.68
CHMP3-204ENST00000409727 NGFP01138 241 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 IGLV3-1P01715 115 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 SERPINA5P05154 406 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 COX5BP10606 129 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 FSTP19883 344 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 IL32P24001 234 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 OPRM1P35372 400 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 DCTN2Q13561 401 aaKnown RBP10.8□□□□□ -0.68
CHMP3-204ENST00000409727 P2RY6Q15077 328 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 C16orf87Q6PH81 154 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 PCSK4Q6UW60 755 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 CCDC190Q86UF4 302 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 JAGN1Q8N5M9 183 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 WDR31Q8NA23 367 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 OR1M1Q8NGA1 313 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 LGALS14Q8TCE9 139 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 NPRL2Q8WTW4 380 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 ACOT12Q8WYK0 555 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 C1QTNF5Q9BXJ0 243 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 SP140LQ9H930 580 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 ATPIF1Q9UII2 106 aa10.8□□□□□ -0.68
CHMP3-204ENST00000409727 ERVH48-1M5A8F1 160 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 MTRF1O75570 445 aaKnown RBP10.79□□□□□ -0.68
CHMP3-204ENST00000409727 EIF4EP06730 217 aaKnown RBP10.79□□□□□ -0.68
CHMP3-204ENST00000409727 OCMP0CE72 109 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF12P17014 697 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 ELK1P19419 428 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 RAB3AP20336 220 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 ACKR3P25106 362 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 AZGP1P25311 298 aaKnown RBP10.79□□□□□ -0.68
CHMP3-204ENST00000409727 P2RY14Q15391 338 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 TBC1D28Q2M2D7 210 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 CNIH2Q6PI25 160 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 FAM131AQ6UXB0 335 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF101Q8IZC7 436 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 C1orf162Q8NEQ5 155 aaPredicted RBP10.79□□□□□ -0.68
CHMP3-204ENST00000409727 SEMA6DQ8NFY4 1073 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 OR52N4Q8NGI2 321 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 BORCS5Q969J3 196 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF75AQ96N20 296 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 SPACA5Q96QH8 159 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 ZCCHC4Q9H5U6 513 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 V9GYS6 101 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 SPTA1P02549 2419 aa10.79□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF14P17017 642 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-204ENST00000409727 BDKRB2P30411 391 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 DDOSTP39656 456 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 WNT5AP41221 380 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 PSMD7P51665 324 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 CASP6P55212 293 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 FAM27E3Q08E93 113 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 HLXQ14774 488 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-204ENST00000409727 GLT8D1Q68CQ7 371 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 LIX1LQ8IVB5 337 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 CCDC36Q8IYA8 594 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 MARVELD3Q96A59 401 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 S100PBPQ96BU1 408 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 KCNK15Q9H427 330 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 PTTG3PQ9NZH4 202 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 OSGIN2Q9Y236 505 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 ARPC4-TTLL3A0A0A6YYG9 625 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 FABP12A6NFH5 140 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 XRCC2O43543 280 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 SULT1B1O43704 296 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 HCKP08631 526 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 FAM157BP0CG42 384 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 HOXB1P14653 301 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-204ENST00000409727 ZNF45Q02386 682 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 DYNC1I2Q13409 638 aaKnown RBP10.78□□□□□ -0.68
CHMP3-204ENST00000409727 RAB11BQ15907 218 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 SPATA46Q5T0L3 261 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 ST6GALNAC3Q8NDV1 305 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 AKAP1Q92667 903 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHMP3-204ENST00000409727 APOBEC3DQ96AK3 386 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-204ENST00000409727 CCDC120Q96HB5 630 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 WDFY2Q96P53 400 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 POFUT1Q9H488 388 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 TMEM138Q9NPI0 162 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 ABRACLQ9P1F3 81 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 MYEF2Q9P2K5 600 aaKnown RBP10.78□□□□□ -0.68
CHMP3-204ENST00000409727 EXTL2Q9UBQ6 330 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 STEAP1Q9UHE8 339 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 STARD10Q9Y365 291 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 V9GYH0 126 aa10.78□□□□□ -0.68
CHMP3-204ENST00000409727 hCG_38984A0A1B0GV85 526 aa10.77□□□□□ -0.69
CHMP3-204ENST00000409727 OR5H1A6NKK0 313 aa10.77□□□□□ -0.69
CHMP3-204ENST00000409727 A8MXE2 369 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms