RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CT55Q8WUE5 264 aa13.42□□□□□ -0.26
SCAMP4-202ENST00000409472 NKD1Q969G9 470 aa13.42□□□□□ -0.26
SCAMP4-202ENST00000409472 A0A0J9YW62 118 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 A0A1W2PNU3 283 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 LINC00587B1AMM8 73 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 RBBP9O75884 186 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 APOC3P02656 99 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 CD3DP04234 171 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 NMBP08949 121 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 CD63P08962 238 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 VSIG10L2P0DP72 767 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 CD37P11049 281 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 ZNF121P58317 390 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 SLC35A1P78382 337 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 TOMM20Q15388 145 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 PDSS1Q5T2R2 415 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 TMEM244Q5VVB8 128 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 KLHL24Q6TFL4 600 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 OR8B12Q8NGG6 310 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 OR2T35Q8NGX2 323 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 ZNF837Q96EG3 531 aaPredicted RBP13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 CXorf58Q96LI9 332 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 PISDQ9UG56 409 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 TCFL5Q9UL49 500 aa13.41□□□□□ -0.26
SCAMP4-202ENST00000409472 LOC390937A0A1W2PQ73 354 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 NAP1L6A6NFF2 107 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 ZNF878C9JN71 531 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 TOXO94900 526 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 NDUFB6O95139 128 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 RFPL3SP0C7P2 107 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 GTF2F2P13984 249 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 TCN2P20062 427 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 HSD11B1P28845 292 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 UBE2MP61081 183 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 UNC119Q13432 240 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 ZNF239Q16600 458 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 YRDCQ86U90 279 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 NAA40Q86UY6 237 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 SFXN2Q96NB2 322 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 ZNF726A6NNF4 738 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 GATCO43716 136 aaKnown RBP13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 PMS2P2O95744 297 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 DSCR4P56555 118 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 TSPAN5P62079 268 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 GABREP78334 506 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 DCAF12Q5T6F0 453 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 COMMD2Q86X83 199 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 STPG2Q8N412 459 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 CLEC1AQ8NC01 280 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 OR51S1Q8NGJ8 323 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 OR2AJ1Q8NGZ0 328 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 SEH1LQ96EE3 360 aa13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 METTL17Q9H7H0 456 aaPredicted RBP13.4□□□□□ -0.26
SCAMP4-202ENST00000409472 A0A1B0GUH1 482 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 A0A1B0GW55 424 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 TMEM235A6NFC5 223 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 B4E171 279 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 LGALS8O00214 317 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 GP1BAP07359 652 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DUX4L2P0CJ85 424 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DUX4L3P0CJ86 424 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DUX4L4P0CJ87 422 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DUX4L5P0CJ88 424 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DUX4L6P0CJ89 424 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DUX4L7P0CJ90 424 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 GABRA1P14867 456 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF17P17021 662 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 PRSS3P35030 304 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 TSPAN7P41732 249 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 SSTP61278 116 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 PMPCAQ10713 525 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 SGCAQ16586 387 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 C1orf100Q5SVJ3 147 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 GLDNQ6ZMI3 551 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 ABHD12BQ7Z5M8 362 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 GALNT16Q8N428 558 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 GPX8Q8TED1 209 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 FAM71F1Q96KD3 344 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 GINS4Q9BRT9 223 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 CHIAQ9BZP6 476 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 ACTR6Q9GZN1 396 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DEPPQ9NTK1 212 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 DUX4Q9UBX2 424 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 TINAGQ9UJW2 476 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 EDARQ9UNE0 448 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 NPTNQ9Y639 398 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 M0QYG6 137 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 IFNA4P05014 189 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 LPLP06858 475 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 FABP1P07148 127 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 H2AFB1P0C5Y9 115 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 BDKRB2P30411 391 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 CX3CR1P49238 355 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 NLRC3Q7RTR2 1065 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 OR1M1Q8NGA1 313 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 SCARB1Q8WTV0 552 aa13.39□□□□□ -0.27
SCAMP4-202ENST00000409472 GPR84Q9NQS5 396 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms