RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PMS2P1A4D2B8 440 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 HRKO00198 91 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 FOXS1O43638 330 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 PMP2P02689 132 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 OR8U8P0C7N1 319 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 RAB5AP20339 215 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 SULT1A2P50226 295 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 RAB38P57729 211 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 EGR4Q05215 589 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 AWAT1Q58HT5 328 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 BCORP1Q8N888 145 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 DTWD2Q8NBA8 298 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 KTI12Q96EK9 354 aaPredicted RBP13.77□□□□□ -0.21
LIMS2-205ENST00000409455 ELF4Q99607 663 aaPredicted RBP13.77□□□□□ -0.21
LIMS2-205ENST00000409455 PDE7BQ9NP56 450 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 DNAJB11Q9UBS4 358 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 WIPF3A6NGB9 483 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 ADAP1O75689 374 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 SNRNP70P08621 437 aaKnown RBP13.77□□□□□ -0.21
LIMS2-205ENST00000409455 HPGDP15428 266 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 NXPH1P58417 271 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 EBPQ15125 230 aaKnown RBP13.77□□□□□ -0.21
LIMS2-205ENST00000409455 TGIF1Q15583 401 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 RPL7L1Q6DKI1 246 aaKnown RBP13.77□□□□□ -0.21
LIMS2-205ENST00000409455 OOSP2Q86WS3 158 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 CSNK1A1LQ8N752 337 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 BHLHE23Q8NDY6 225 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 BAHD1Q8TBE0 780 aaPredicted RBP13.77□□□□□ -0.21
LIMS2-205ENST00000409455 SECTM1Q8WVN6 248 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 ISOC2Q96AB3 205 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 RGCCQ9H4X1 137 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 LRP12Q9Y561 859 aa13.77□□□□□ -0.21
LIMS2-205ENST00000409455 AP4M1O00189 453 aa13.76□□□□□ -0.21
LIMS2-205ENST00000409455 ACKR3P25106 362 aa13.76□□□□□ -0.21
LIMS2-205ENST00000409455 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
LIMS2-205ENST00000409455 GKN2Q86XP6 184 aa13.76□□□□□ -0.21
LIMS2-205ENST00000409455 OR4K15Q8NH41 348 aa13.76□□□□□ -0.21
LIMS2-205ENST00000409455 DMRT1Q9Y5R6 373 aa13.76□□□□□ -0.21
LIMS2-205ENST00000409455 ALPK2Q86TB3 2170 aa13.76□□□□□ -0.21
LIMS2-205ENST00000409455 A0A0J9YY10 115 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 LOC107986453A0A1B0GWG9 222 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 A0A1W2PPH5 198 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 C7orf77A4D0Y5 90 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 M0R036 132 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 SCGNO76038 276 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 PDGFBP01127 241 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-205ENST00000409455 CT45A8P0DMV1 189 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 CT45A9P0DMV2 189 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 GNB3P16520 340 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 LAP3P28838 519 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 RAB2AP61019 212 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 BIKQ13323 160 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 CT45A2Q5DJT8 189 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 Q6ZRG5 221 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-205ENST00000409455 OR51F2Q8NH61 342 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 TERB2Q8NHR7 220 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 DNASE2BQ8WZ79 361 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 RSRP1Q9BUV0 290 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 METTL8Q9H825 291 aaKnown RBP13.75□□□□□ -0.21
LIMS2-205ENST00000409455 FLVCR1Q9Y5Y0 555 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 A0A1W2PR64 198 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 ZNF729A6NN14 1252 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-205ENST00000409455 SFT2D2O95562 160 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 CD1CP29017 333 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 RAB5CP51148 216 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 S100A10P60903 97 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 HNRNPKP61978 463 aaKnown RBP eCLIP13.75□□□□□ -0.21
LIMS2-205ENST00000409455 SQSTM1Q13501 440 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 RAB32Q13637 225 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 DEFB133Q30KQ1 61 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 ARMC6Q6NXE6 501 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 CLEC18BQ6UXF7 455 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 METTL21AQ8WXB1 218 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 CNTD2Q9H8S5 307 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 EMC9Q9Y3B6 208 aa13.75□□□□□ -0.21
LIMS2-205ENST00000409455 C11orf98E9PRG8 122 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 HCRTR1O43613 425 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 SLC16A7O60669 478 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 OR8U9P0C7N5 309 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 FASLGP48023 281 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 OR2B8PP59922 312 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-205ENST00000409455 OR8U1Q8NH10 309 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 C8orf44Q96CB5 159 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 BCAT2O15382 392 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-205ENST00000409455 CST4P01036 141 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 GSK3AP49840 483 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 CD226Q15762 336 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 OR2B11Q5JQS5 317 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 TAAR8Q969N4 342 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 PFDN5Q99471 154 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 CCDC3Q9BQI4 270 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 ABHD6Q9BV23 337 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 DUSP15Q9H1R2 295 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-205ENST00000409455 C5orf66Q9H5L9 145 aa13.74□□□□□ -0.21
LIMS2-205ENST00000409455 STARD5Q9NSY2 213 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms