RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MAGOHP61326 146 aaKnown RBP13.6□□□□□ -0.23
CHMP3-203ENST00000409225 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
CHMP3-203ENST00000409225 TRAM2Q15035 370 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 PCK2Q16822 640 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 MICBQ29980 383 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 CYBRD1Q53TN4 286 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 RABL3Q5HYI8 236 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 TBPL2Q6SJ96 375 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 ZNF730Q6ZMV8 503 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 CFAP77Q6ZQR2 320 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 PTCHD4Q6ZW05 846 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 CROCCP2Q86T23 111 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 H1FXQ92522 213 aaKnown RBP13.6□□□□□ -0.23
CHMP3-203ENST00000409225 FNDC11Q9BVV2 318 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 NDEL1Q9GZM8 345 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 J3KTA2 159 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 CD33P20138 364 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 SDHAP31040 664 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 ZNF92Q03936 586 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 ECH1Q13011 328 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 NANOGP8Q6NSW7 305 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 PGM2L1Q6PCE3 622 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 SLC36A1Q7Z2H8 476 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 NDUFA11Q86Y39 141 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 OFCC1Q8IZS5 231 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 LNX2Q8N448 690 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 OR51G2Q8NGK0 314 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 OR2AE1Q8NHA4 323 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 SLC7A13Q8TCU3 470 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 LRRC29Q8WV35 223 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 NKX3-1Q99801 234 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-203ENST00000409225 ATF6BQ99941 703 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 DCTN5Q9BTE1 182 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 FAM234AQ9H0X4 552 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 RAB18Q9NP72 206 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 ADA2Q9NZK5 511 aa13.59□□□□□ -0.23
CHMP3-203ENST00000409225 PRPF19Q9UMS4 504 aaKnown RBP13.59□□□□□ -0.23
CHMP3-203ENST00000409225 A0A087WUU8 490 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 DCTN6O00399 190 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 ACOT8O14734 319 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 NDUFB3O43676 98 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 PAX6P26367 422 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 MDH1P40925 334 aaKnown RBP13.58□□□□□ -0.24
CHMP3-203ENST00000409225 CDKN2AP42771 156 aaKnown RBP13.58□□□□□ -0.24
CHMP3-203ENST00000409225 ACSM1Q08AH1 577 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 HABP2Q14520 560 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-203ENST00000409225 LRRC75BQ2VPJ9 315 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 GPR139Q6DWJ6 353 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 SLC18B1Q6NT16 456 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 CRIP3Q6Q6R5 217 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 MBOAT2Q6ZWT7 520 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 ADCK1Q86TW2 530 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 RNF113BQ8IZP6 322 aaKnown RBP13.58□□□□□ -0.24
CHMP3-203ENST00000409225 LZICQ8WZA0 190 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 SEH1LQ96EE3 360 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 DMRTB1Q96MA1 342 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-203ENST00000409225 NPFFR1Q9GZQ6 430 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 MRPL15Q9P015 296 aaKnown RBP13.58□□□□□ -0.24
CHMP3-203ENST00000409225 IER3IP1Q9Y5U9 82 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 SNX13Q9Y5W8 968 aa13.58□□□□□ -0.24
CHMP3-203ENST00000409225 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-203ENST00000409225 ADARB2-AS1A8MUL3 147 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 FFAR1O14842 300 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 CHST1O43916 411 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 NDUFB2O95178 105 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 PPP1R3DO95685 299 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 SELLP14151 372 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 MUC1P15941 1255 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-203ENST00000409225 ANOS1P23352 680 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 TPTEP56180 551 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 MZT1Q08AG7 82 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 SNAI3Q3KNW1 292 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 LRRC10Q5BKY1 277 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 NCR3LG1Q68D85 454 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 DNM1P34Q6PK57 102 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 TMPRSS11FQ6ZWK6 438 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 SRA1Q9HD15 236 aaKnown RBP13.57□□□□□ -0.24
CHMP3-203ENST00000409225 NRIP3Q9NQ35 241 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 C14orf119Q9NWQ9 140 aa13.57□□□□□ -0.24
CHMP3-203ENST00000409225 IGLV1-36A0A0B4J1U3 117 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 WI2-2373I1.2A0A1W2PRP0 233 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 M0R135 149 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 BHLHE40O14503 412 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 CRABP1P29762 137 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 BMXP51813 675 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 CD69Q07108 199 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 CYLC2Q14093 348 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-203ENST00000409225 GLYATL3Q5SZD4 288 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 PGBD2Q6P3X8 592 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 ERICH5Q6P6B1 374 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 TSEN54Q7Z6J9 526 aaKnown RBP13.56□□□□□ -0.24
CHMP3-203ENST00000409225 C11orf53Q8IXP5 236 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 OR2AJ1Q8NGZ0 328 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 C8orf46Q8TAG6 207 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 ZNF799Q96GE5 643 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 FAM46AQ96IP4 442 aaKnown RBP13.56□□□□□ -0.24
CHMP3-203ENST00000409225 PARD6BQ9BYG5 372 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 METTL8Q9H825 291 aaKnown RBP13.56□□□□□ -0.24
CHMP3-203ENST00000409225 ZNF702PQ9H963 129 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms