RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RNF7Q9UBF6 113 aa7.63□□□□□ -1.19
SNORD88A-201ENST00000408314 DNAJB9Q9UBS3 223 aa7.63□□□□□ -1.19
SNORD88A-201ENST00000408314 CLN8Q9UBY8 286 aa7.63□□□□□ -1.19
SNORD88A-201ENST00000408314 ENOPH1Q9UHY7 261 aa7.63□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNF391Q9UJN7 358 aa7.63□□□□□ -1.19
SNORD88A-201ENST00000408314 NUP50Q9UKX7 468 aa7.63□□□□□ -1.19
SNORD88A-201ENST00000408314 INSIG2Q9Y5U4 225 aa7.63□□□□□ -1.19
SNORD88A-201ENST00000408314 TRAV38-1A0A0B4J264 116 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 A6NLC8 198 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 LGALS8O00214 317 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 TBX1O43435 398 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 ENSAO43768 121 aaKnown RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 FAM20BO75063 409 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 DNAJC8O75937 253 aaPredicted RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 PTBP3O95758 552 aaKnown RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 CYB5R3P00387 301 aaPredicted RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 FSHBP01225 129 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 HLA-DPB1P04440 258 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 GYPBP06028 91 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 WNT2P09544 360 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 H2BFMP0C1H6 154 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 OSMP13725 252 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 CA6P23280 308 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 POU1F1P28069 291 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 GNALP38405 381 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 RPS27P42677 84 aaKnown RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 MTNR1AP48039 350 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 PRKXP51817 358 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 CBX1P83916 185 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNF92Q03936 586 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 PPP1R8Q12972 351 aaKnown RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 SNAI3Q3KNW1 292 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 SPRNQ5BIV9 151 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 SLC35D3Q5M8T2 416 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 GLYATL3Q5SZD4 288 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNF362Q5T0B9 420 aaPredicted RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 LCN1P1Q5VSP4 162 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 DPY19L4Q7Z388 723 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNF511Q8NB15 262 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 DEFB108BQ8NET1 73 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 OR56B2PQ8NGI1 322 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 OR10S1Q8NGN2 331 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNF420Q8TAQ5 688 aaPredicted RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 CANT1Q8WVQ1 401 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 RNF133Q8WVZ7 376 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 GCDHQ92947 438 aaPredicted RBP7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 SPSB4Q96A44 273 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 NIPSNAP1Q9BPW8 284 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 MARCH7Q9H992 704 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 TMEM165Q9HC07 324 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 DCAF16Q9NXF7 216 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 VNN3Q9NY84 501 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 ERVK-18Q9QC07 812 aa7.62□□□□□ -1.19
SNORD88A-201ENST00000408314 IGHV2-70DA0A0C4DH43 119 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 hCG_1807616A0A1W2PRN6 198 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 ANXA2P2A6NMY6 339 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 H0YL77 283 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 FKBP6O75344 327 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 ATP5HO75947 161 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 VENTXO95231 258 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 AVPP01185 164 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 LIPFP07098 398 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 LYNP07948 512 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 ZFP36P26651 326 aaKnown RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 NAA10P41227 235 aaPredicted RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 BPIFB3P59826 476 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 RPS7P62081 194 aaKnown RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 IL5RAQ01344 420 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 MAB21L1Q13394 359 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 GINS1Q14691 196 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 KLHL12Q53G59 568 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 LINC01590Q5TEZ4 76 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 KCTD18Q6PI47 426 aaPredicted RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 C1orf229Q6ZS94 237 aaPredicted RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 OR2AE1Q8NHA4 323 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 OTOSQ8NHW6 89 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 RAB40AQ8WXH6 277 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 PGAM5Q96HS1 289 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 CLPTM1LQ96KA5 538 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 SLC6A7Q99884 636 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 MICU1Q9BPX6 476 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 TMEM246Q9BRR3 403 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 ABHD6Q9BV23 337 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 MS4A7Q9GZW8 240 aaPredicted RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 OR51V1Q9H2C8 321 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 MMADHCQ9H3L0 296 aaPredicted RBP7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 SLC25A19Q9HC21 320 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 UFSP2Q9NUQ7 469 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 OPN4Q9UHM6 478 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 N6AMT1Q9Y5N5 214 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 TMEM14AQ9Y6G1 99 aa7.61□□□□□ -1.19
SNORD88A-201ENST00000408314 TCRBV3S1A0A5B6 114 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 OOEPA6NGQ2 149 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 FAM183AA6NL82 134 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 ECDO95905 644 aaPredicted RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 CLUP10909 449 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 SLC2A1P11166 492 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 FCGR1AP12314 374 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 OPRL1P41146 370 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms