RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FDX2Q6P4F2 183 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 TMPRSS11AQ6ZMR5 421 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 PRSS35Q8N3Z0 413 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 ERVK-18Q9QC07 812 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 ZNF391Q9UJN7 358 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 BLOC1S6Q9UL45 172 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 PMF1-BGLAPU3KQ54 211 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 M0R233 179 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 TIMM8AO60220 97 aaPredicted RBP25.07■■□□□ 1.6
USP42-202ENST00000404008 TTRP02766 147 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 MT-ND5P03915 603 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 CFL1P23528 166 aaKnown RBP25.07■■□□□ 1.6
USP42-202ENST00000404008 CDKN1AP38936 164 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 PPOXP50336 477 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 MMP15P51511 669 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 RNLSQ5VYX0 342 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 ELMOD2Q8IZ81 293 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 OR52N1Q8NH53 320 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 SPRYD4Q8WW59 207 aaPredicted RBP25.07■■□□□ 1.6
USP42-202ENST00000404008 LYZL4Q96KX0 146 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 CDCA4Q9BXL8 241 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 DYNLRB1Q9NP97 96 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 GPR160Q9UJ42 338 aa25.07■■□□□ 1.6
USP42-202ENST00000404008 hCG_38984A0A1B0GV85 526 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 H7C417 338 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 IGLV3-1P01715 115 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 SELEP16581 610 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 FAM3AP98173 230 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 MRPL28Q13084 256 aaKnown RBP25.06■■□□□ 1.6
USP42-202ENST00000404008 WDR38Q5JTN6 314 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 NAV2Q8IVL1 2488 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 OR2G2Q8NGZ5 317 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 CGGBP1Q9UFW8 167 aaPredicted RBP25.06■■□□□ 1.6
USP42-202ENST00000404008 SLC22A13Q9Y226 551 aa25.06■■□□□ 1.6
USP42-202ENST00000404008 IQCF6A8MYZ5 107 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 HTR1AP08908 422 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 NANOS3P60323 173 aaKnown RBP25.05■■□□□ 1.6
USP42-202ENST00000404008 ZNF485Q8NCK3 441 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 OR51E1Q8TCB6 317 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 MBD6Q96DN6 1003 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 PLSCR5A0PG75 271 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 E9PI62 339 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 RGS10O43665 173 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 NAT2P11245 290 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 KIR3DL2P43630 455 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 GBX2P52951 348 aaPredicted RBP25.05■■□□□ 1.6
USP42-202ENST00000404008 OR5AS1Q8N127 324 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 HAVCR2Q8TDQ0 301 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 GTF3AQ92664 365 aaKnown RBP25.05■■□□□ 1.6
USP42-202ENST00000404008 MS4A5Q9H3V2 200 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 GPR84Q9NQS5 396 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 CYSLTR2Q9NS75 346 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 ZNF701Q9NV72 531 aaPredicted RBP25.05■■□□□ 1.6
USP42-202ENST00000404008 BEX4Q9NWD9 120 aaPredicted RBP25.05■■□□□ 1.6
USP42-202ENST00000404008 FRRS1LQ9P0K9 344 aa25.05■■□□□ 1.6
USP42-202ENST00000404008 GGT3PA6NGU5 568 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 CD300LBA8K4G0 201 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 MYL12BO14950 172 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 PAX1P15863 534 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 LIPAP38571 399 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 GSK3AP49840 483 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 GABARAPL2P60520 117 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 ZCCHC24Q8N2G6 241 aaKnown RBP25.04■■□□□ 1.6
USP42-202ENST00000404008 NANOGP1Q8N7R0 232 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 BHLHE23Q8NDY6 225 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 GATAD2BQ8WXI9 593 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 SOX7Q9BT81 388 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 YTHDF1Q9BYJ9 559 aaKnown RBP25.04■■□□□ 1.6
USP42-202ENST00000404008 ERGIC3Q9Y282 383 aa25.04■■□□□ 1.6
USP42-202ENST00000404008 LILRA1O75019 489 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 TGM4P49221 684 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 CCR9P51686 369 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 TNK1Q13470 666 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 IRF3Q14653 427 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 OR8B8Q15620 311 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 DEFB113Q30KQ7 82 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 PRSS48Q7RTY5 328 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 KLBQ86Z14 1044 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 OR8G5Q8NG78 346 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 VRK1Q99986 396 aaPredicted RBP25.03■■□□□ 1.6
USP42-202ENST00000404008 MSL2Q9HCI7 577 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 BABAM2Q9NXR7 383 aa25.03■■□□□ 1.6
USP42-202ENST00000404008 ZSCAN5BA6NJL1 495 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 P2RY10O00398 339 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 MT-ND2P03891 347 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 EEF1B2P24534 225 aaKnown RBP25.02■■□□□ 1.6
USP42-202ENST00000404008 ZNF81P51508 661 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 ALKBH1Q13686 389 aaKnown RBP25.02■■□□□ 1.6
USP42-202ENST00000404008 ODF4Q2M2E3 257 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 ZMAT1Q5H9K5 638 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 Q6ZR03 302 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 COMMD2Q86X83 199 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 OR56B2PQ8NGI1 322 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 MND1Q9BWT6 205 aa25.02■■□□□ 1.6
USP42-202ENST00000404008 A0A1B0GTI1 187 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 C17orf100A8MU93 164 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 UBCP0CG48 685 aaKnown RBP25.01■■□□□ 1.59
USP42-202ENST00000404008 DDOSTP39656 456 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 GTF2A1P52655 376 aaPredicted RBP25.01■■□□□ 1.59
USP42-202ENST00000404008 WNT4P56705 351 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms