RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PRO0461Q9UI25 63 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 FLVCR2Q9UPI3 526 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 SAR1BQ9Y6B6 198 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 ARID1AO14497 2285 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 PALLDQ8WX93 1383 aa2.35□□□□□ -2.03
HMGB1P17-201ENST00000403495 ADAMTS13Q76LX8 1427 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 MYO10Q9HD67 2058 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 TRAV19A0A0A6YYK7 116 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 IGHV1-69DA0A0B4J2H0 117 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 TMEM223A0PJW6 202 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF705GA8MUZ8 300 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 DNASE2O00115 360 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 POLR1CO15160 346 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 YKT6O15498 198 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 RBFOX2O43251 390 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 ERI3O43414 337 aaKnown RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 ZNF207O43670 478 aaKnown RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 REM1O75628 298 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 SERPINB7O75635 380 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 CATP04040 527 aaKnown RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 MRPL3P09001 348 aaKnown RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 CFHR2P36980 270 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 PAFAH1B2P68402 229 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 KIR2DS1Q14954 304 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 MPV17L2Q567V2 206 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 TCEAL5Q5H9L2 206 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 AVPI1Q5T686 147 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 NANOGP8Q6NSW7 305 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 WDR86Q86TI4 376 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 UNC93AQ86WB7 457 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 FAM58AQ8N1B3 248 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 FBXO36Q8NEA4 188 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR10W1Q8NGF6 305 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR4A15Q8NGL6 344 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 OR13C9Q8NGT0 318 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 LILRB4Q8NHJ6 448 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 UBALD1Q8TB05 177 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 CIRBP-AS1Q8TBR5 109 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 TCP10LQ8TDR4 215 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 FRZBQ92765 325 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 TCEAL3Q969E4 200 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 DCPSQ96C86 337 aaKnown RBP2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 MSANTD3Q96H12 275 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 CSPG4P5Q96PW8 444 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 TMEM243Q9BU79 118 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 MED4Q9NPJ6 270 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 SIRT7Q9NRC8 400 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 FBXO8Q9NRD0 319 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 KPTNQ9Y664 436 aa2.34□□□□□ -2.03
HMGB1P17-201ENST00000403495 COL22A1Q8NFW1 1626 aaPredicted RBP2.34□□□□□ -2.04
HMGB1P17-201ENST00000403495 IGKV1-27A0A075B6S5 117 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 A0A0U1RQV1 116 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 A6NDN8 102 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 K7ERQ8 282 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 B4GALT5O43286 388 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 XRCC2O43543 280 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 KDELR3O43731 214 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 SLC16A7O60669 478 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 PTTG1O95997 202 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 APOA1P02647 267 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 APCSP02743 223 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 HOXB8P17481 243 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 IGFBP3P17936 291 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 PRKACBP22694 351 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 LOXP28300 417 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 POLR2IP36954 125 aaKnown RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 PPICP45877 212 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 SYNJ2BPP57105 145 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 EIF4EBP2Q13542 120 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 C6orf183Q5T699 404 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 Q5W150 140 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 ULK3Q6PHR2 472 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 LINC00336Q6ZUF6 198 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 CDKL3Q8IVW4 592 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 OR2L8Q8NGY9 312 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 LRRC20Q8TCA0 184 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 BAALCQ8WXS3 180 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 GHSRQ92847 366 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 ATP6V1G3Q96LB4 118 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 FOPNLQ96NB1 174 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 CDX2Q99626 313 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 RBBP8Q99708 897 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 TMEM175Q9BSA9 504 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 GGTLC1Q9BX51 225 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 CALN1Q9BXU9 219 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 SAMD10Q9BYL1 202 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 TM6SF2Q9BZW4 377 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 RRAGDQ9NQL2 400 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF282Q9UDV7 671 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 HYOU1Q9Y4L1 999 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 ADGRA3Q8IWK6 1321 aa2.33□□□□□ -2.04
HMGB1P17-201ENST00000403495 TRAV6A0A075B6T7 132 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 IGHV1OR15-9A0A0B4J2B8 117 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 SLC22A20A6NK97 555 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 KRBOX1C9JBD0 128 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 HSBP1L1C9JCN9 74 aa2.32□□□□□ -2.04
HMGB1P17-201ENST00000403495 H0YJW9 148 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms