RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GRHPRQ9UBQ7 328 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 MAB21L2Q9Y586 359 aa9.67□□□□□ -0.86
SPTLC1P3-201ENST00000403408 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 IGLV1-36A0A0B4J1U3 117 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 F5H5K5 113 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NDUFA2O43678 99 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 AHCYL1O43865 530 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 GRPP07492 148 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RPL4P36578 427 aaKnown RBP9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NFYCQ13952 458 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 KCNJ8Q15842 424 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PCK2Q16822 640 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CYBRD1Q53TN4 286 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SLC18B1Q6NT16 456 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 Q6ZS46 218 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TSEN54Q7Z6J9 526 aaKnown RBP9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 GJC3Q8NFK1 279 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 C7orf26Q96N11 449 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ZNF583Q96ND8 569 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 WWC2-AS2Q96NR7 200 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SSX3Q99909 188 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 DCTN5Q9BTE1 182 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NRIP3Q9NQ35 241 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 BAG5Q9UL15 447 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 NDUFAF1Q9Y375 327 aa9.66□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SOCS2O14508 198 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 LCATP04180 440 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 MSX2P35548 267 aaPredicted RBP9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TGM4P49221 684 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 UBE2E1P51965 193 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 MAGOHP61326 146 aaKnown RBP9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 CSNK2BP67870 215 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ST3GAL3Q11203 375 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TRAP1Q12931 704 aaKnown RBP9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 IKZF1Q13422 519 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 C11orf91Q3C1V1 193 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 ZBED5Q49AG3 693 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TMPRSS11FQ6ZWK6 438 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PGAP1Q75T13 922 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 VTCN1Q7Z7D3 282 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OFCC1Q8IZS5 231 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PLPP7Q8NBV4 271 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 OR4C13Q8NGP0 309 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 C8orf46Q8TAG6 207 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SPRYD4Q8WW59 207 aaPredicted RBP9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 RASSF5Q8WWW0 418 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 TLCD1Q96CP7 247 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 PRPF19Q9UMS4 504 aaKnown RBP9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 SIGLEC7Q9Y286 467 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 IER3IP1Q9Y5U9 82 aa9.65□□□□□ -0.86
SPTLC1P3-201ENST00000403408 HTR3EA5X5Y0 456 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 XKRYO14609 159 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GMDSO60547 372 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 FBXO24O75426 580 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 PAHP00439 452 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SDHAP31040 664 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GGT2P36268 569 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MDH1P40925 334 aaKnown RBP9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 BMXP51813 675 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GUCA2AQ02747 115 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ANKDD1AQ495B1 522 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GLYATL3Q5SZD4 288 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MBOAT2Q6ZWT7 520 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR6V1Q8N148 313 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SLC26A10Q8NG04 563 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR4S1Q8NGB4 309 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR5T2Q8NGG2 359 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR2T6Q8NHC8 308 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ACOT11Q8WXI4 607 aaPredicted RBP9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MAP6Q96JE9 813 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 PARD6BQ9BYG5 372 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 WNT10AQ9GZT5 417 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MEGF9Q9H1U4 602 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 B9D1Q9UPM9 204 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 POLR1DQ9Y2S0 133 aa9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CAB39Q9Y376 341 aaPredicted RBP9.64□□□□□ -0.87
SPTLC1P3-201ENST00000403408 hCG_1807616A0A1W2PRN6 198 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 A6NLC8 198 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TXNDC12O95881 172 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 EEF1B2P24534 225 aaKnown RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 KDELR2P33947 212 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RPS27P42677 84 aaKnown RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 EMX1Q04741 257 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 PLECQ15149 4684 aaKnown RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 DGUOKQ16854 277 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 LRRC23Q53EV4 343 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 STUMQ69YW2 141 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 C11orf88Q6PI97 169 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 WDR82Q6UXN9 313 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MRPL21Q7Z2W9 205 aaKnown RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NDUFA11Q86Y39 141 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 DYNAPQ8N1N2 210 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 Q8N2B8 174 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR56B2PQ8NGI1 322 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SLC7A13Q8TCU3 470 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 LRRC29Q8WV35 223 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 FAM46AQ96IP4 442 aaKnown RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TPD52L3Q96J77 140 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GPX7Q96SL4 187 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 PITX2Q99697 317 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms