RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TUBG2Q9NRH3 451 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 LSM2Q9Y333 95 aaKnown RBP13.65□□□□□ -0.22
HMGA1-204ENST00000401473 AKAP9Q99996 3911 aa13.65□□□□□ -0.22
HMGA1-204ENST00000401473 CHD3Q12873 2000 aaKnown RBP13.65□□□□□ -0.23
HMGA1-204ENST00000401473 LILRA1O75019 489 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 IGLV3-1P01715 115 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 IGHV3-13P01766 116 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 RAC2P15153 192 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 CHN2P52757 468 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 GABARAPL2P60520 117 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 FAM3AP98173 230 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 MALLQ13021 153 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 OR2T2Q6IF00 324 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 C11orf71Q6IPW1 123 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 PGAP1Q75T13 922 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 DTX2Q86UW9 622 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 FBXL14Q8N1E6 418 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 ZCCHC24Q8N2G6 241 aaKnown RBP13.64□□□□□ -0.23
HMGA1-204ENST00000401473 IGFBPL1Q8WX77 278 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 REEP6Q96HR9 211 aa13.64□□□□□ -0.23
HMGA1-204ENST00000401473 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
HMGA1-204ENST00000401473 A0A0U1RQV5 110 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 A0A1B0GTI1 187 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 GCH1P30793 250 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 WNT4P56705 351 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 KLF3P57682 345 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-204ENST00000401473 EMX1Q04741 257 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-204ENST00000401473 ALKBH1Q13686 389 aaKnown RBP13.63□□□□□ -0.23
HMGA1-204ENST00000401473 EFNB3Q15768 340 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 TIGD6Q17RP2 521 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 SP140LQ9H930 580 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 GPR84Q9NQS5 396 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 ST6GALNAC2Q9UJ37 374 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 OTOGQ6ZRI0 2925 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 OR4C45A6NMZ5 311 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 VSTM5A8MXK1 200 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 H3BSH0 61 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 MYL12BO14950 172 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 XRCC2O43543 280 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 EVX1P49640 407 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 MMP15P51511 669 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 GBX2P52951 348 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-204ENST00000401473 SPHARQ15513 63 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 BCL2L15Q5TBC7 163 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 SPARTQ8N0X7 666 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 ZFP41Q8N8Y5 198 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 BHLHE23Q8NDY6 225 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 PDCD1LG2Q9BQ51 273 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 MND1Q9BWT6 205 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 MOB1AQ9H8S9 216 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 CBLN4Q9NTU7 201 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 PURGQ9UJV8 347 aaKnown RBP13.63□□□□□ -0.23
HMGA1-204ENST00000401473 CELSR1Q9NYQ6 3014 aa13.63□□□□□ -0.23
HMGA1-204ENST00000401473 ZNF469Q96JG9 3925 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-204ENST00000401473 hCG_38984A0A1B0GV85 526 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 B9A039 149 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 P2RY10O00398 339 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 ZFPL1O95159 310 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 KITLGP21583 273 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 ACKR3P25106 362 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 ALDH3B1P43353 468 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 TGM4P49221 684 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 CCR9P51686 369 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 KCTD21Q4G0X4 260 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 AGAP6Q5VW22 663 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 MRPL21Q7Z2W9 205 aaKnown RBP13.62□□□□□ -0.23
HMGA1-204ENST00000401473 OR5AS1Q8N127 324 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 GTF3AQ92664 365 aaKnown RBP13.62□□□□□ -0.23
HMGA1-204ENST00000401473 TRAF4Q9BUZ4 470 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-204ENST00000401473 ACOT13Q9NPJ3 140 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 FAIMQ9NVQ4 179 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 TAAR3PQ9P1P4 343 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 MYO9AB2RTY4 2548 aa13.62□□□□□ -0.23
HMGA1-204ENST00000401473 TRBV2A0A0J9YWF9 115 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 CD300LBA8K4G0 201 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 H3BSA7 217 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 OGG1O15527 345 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 PCMT1P22061 227 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 GSK3AP49840 483 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 MED22Q15528 200 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 CCDC58Q4VC31 144 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 C20orf204Q6ZNR8 217 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 Q6ZR03 302 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 PLPP7Q8NBV4 271 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 OR10AC1Q8NH08 325 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 RPS4Y2Q8TD47 263 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 RGCCQ9H4X1 137 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 PPP1R3EQ9H7J1 279 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 OVOL3O00110 214 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 MRPS14O60783 128 aaKnown RBP13.61□□□□□ -0.23
HMGA1-204ENST00000401473 TNFAIP8O95379 198 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 CD53P19397 219 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 SELENOVP59797 346 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 CDK5R1Q15078 307 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 DMKNQ6E0U4 476 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-204ENST00000401473 RPL22L1Q6P5R6 122 aaKnown RBP13.61□□□□□ -0.23
HMGA1-204ENST00000401473 OR51A4Q8NGJ6 313 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 FAM71F1Q96KD3 344 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-204ENST00000401473 MSL2Q9HCI7 577 aa13.61□□□□□ -0.23
HMGA1-204ENST00000401473 PLEKHA6Q9Y2H5 1048 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms