RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MPLP40238 635 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 ANKRD37Q7Z713 158 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 SHARPINQ9H0F6 387 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 OR5H14A6NHG9 310 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 GPANK1O95872 356 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 SMIM4Q8WVI0 70 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 SPRY1O43609 319 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-204ENST00000400337 PSMB6P28072 239 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 CDC20Q12834 499 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 TOMM34Q15785 309 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-204ENST00000400337 ZIC1Q15915 447 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 MAMSTRQ6ZN01 415 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 OR4C16Q8NGL9 310 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 MKRN2OSH3BPM6 223 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 SLC17A2O00624 439 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 XRCC3O43542 346 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 OR2F2O95006 317 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 S100A7P31151 101 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 HMGA2P52926 109 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 SLC25A1P53007 311 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 TRA2AQ13595 282 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL18A1-204ENST00000400337 OR2F1Q13607 317 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 SPATA46Q5T0L3 261 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 TMEM268Q5VZI3 342 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 OR2I1PQ8NGU4 316 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 ZNF816-ZNF321PA0A0X1KG74 233 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 GUCA2AQ02747 115 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 OR6C68A6NDL8 312 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 HLA-DOBP13765 273 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 NOVA1P51513 510 aaKnown RBP16.35■□□□□ 0.21
COL18A1-204ENST00000400337 ZNF626Q68DY1 528 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 ZNF425Q6IV72 752 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 MFSD4AQ8N468 514 aa16.35■□□□□ 0.21
COL18A1-204ENST00000400337 CPEB3Q8NE35 698 aaKnown RBP16.35■□□□□ 0.21
COL18A1-204ENST00000400337 ANGPTL7O43827 346 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CNIH1O95406 144 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 ZIC2O95409 532 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A6P0DMU7 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A5P0DMU8 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A7P0DMV0 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A8P0DMV1 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A9P0DMV2 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 SCGB2A2Q13296 93 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 INSL4Q14641 139 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 ZNF718Q3SXZ3 478 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A2Q5DJT8 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A1Q5HYN5 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CT45A3Q8NHU0 189 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 PRRX2Q99811 253 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 MN1Q10571 1320 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-204ENST00000400337 ADRA2CP18825 462 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 EPHA8P29322 1005 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-204ENST00000400337 GPR12P47775 334 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 PCBP3P57721 371 aaKnown RBP16.34■□□□□ 0.21
COL18A1-204ENST00000400337 TMEM182Q6ZP80 229 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-204ENST00000400337 ACOT7LQ6ZUV0 252 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 OSR2Q8N2R0 312 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 PELI1Q96FA3 418 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 FAM173AQ9BQD7 235 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 SLIRPQ9GZT3 109 aaKnown RBP16.34■□□□□ 0.21
COL18A1-204ENST00000400337 KCNIP2Q9NS61 270 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 SCAF4O95104 1147 aaKnown RBP16.34■□□□□ 0.21
COL18A1-204ENST00000400337 TBPP20226 339 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CCDC190Q86UF4 302 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 FAM185AQ8N0U4 392 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 TIMD4Q96H15 378 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 A0A1B0GUH1 482 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 OR13C7P0DN81 318 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 PSMB3P49720 205 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 CBLN3Q6UW01 205 aa16.34■□□□□ 0.21
COL18A1-204ENST00000400337 ALG1L2C9J202 215 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 TSTD3H0UI37 97 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 KIR2DL3P43628 341 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 WDR38Q5JTN6 314 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 FAM122BQ7Z309 247 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 OR2AK2Q8NG84 335 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 TMED6Q8WW62 240 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 FOXJ3Q9UPW0 622 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.21
COL18A1-204ENST00000400337 FXNQ16595 210 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 OR5M9Q8NGP3 310 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 OR1F12Q8NHA8 337 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 TERB2Q8NHR7 220 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 FBXL4Q9UKA2 621 aa16.33■□□□□ 0.21
COL18A1-204ENST00000400337 ARPC3O15145 178 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 CISD2Q8N5K1 135 aaKnown RBP16.33■□□□□ 0.2
COL18A1-204ENST00000400337 LIMS3P0CW19 117 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 LIMS4P0CW20 117 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 ATF1P18846 271 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 MMP15P51511 669 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 EMP3P54852 163 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 ADIRFQ15847 76 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 THSD4Q6ZMP0 1018 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 OR52B4Q8NGK2 314 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 KNTC1P50748 2209 aa16.33■□□□□ 0.2
COL18A1-204ENST00000400337 IL34Q6ZMJ4 242 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 GCNT2Q8N0V5 402 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 THSD7AQ9UPZ6 1657 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 SSSCA1O60232 199 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms