RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 UBALD2Q8IYN6 164 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 ARHGEF39Q8N4T4 335 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 SIAEQ9HAT2 523 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 TTC3P53804 2025 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 EIF4E2O60573 245 aaKnown RBP12.43□□□□□ -0.42
VAPA-202ENST00000400000 NID1P14543 1247 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 CA6P23280 308 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 G0S2P27469 103 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 MEOX1P50221 254 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 ZNF85Q03923 595 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 SP6Q3SY56 376 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 FAM27D1Q5T7N8 215 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 SPINK14Q6IE38 97 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 C1orf210Q8IVY1 113 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 OXGR1Q96P68 337 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 MRPS14O60783 128 aaKnown RBP12.43□□□□□ -0.42
VAPA-202ENST00000400000 PTTG1IPP53801 180 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 UBTD2Q8WUN7 234 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 POLDIP2Q9Y2S7 368 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 ETV7Q9Y603 341 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 CTU2Q2VPK5 515 aaKnown RBP12.43□□□□□ -0.42
VAPA-202ENST00000400000 OR2T2Q6IF00 324 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 ADAT1Q9BUB4 502 aaKnown RBP12.43□□□□□ -0.42
VAPA-202ENST00000400000 SPNS1Q9H2V7 528 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 ACER3Q9NUN7 267 aa12.43□□□□□ -0.42
VAPA-202ENST00000400000 A0A087WZY1 265 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 S100A11P31949 105 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 CAPZBP47756 277 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 OR2B8PP59922 312 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 SNTB1Q13884 538 aaKnown RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 AFMIDQ63HM1 303 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 OR10P1Q8NGE3 313 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 OR2T6Q8NHC8 308 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 PRSS37A4D1T9 235 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 DNASE2O00115 360 aaPredicted RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 CYR61O00622 381 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 ACHEP22303 614 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 SLC6A12P48065 614 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 RHOBP62745 196 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 HES3Q5TGS1 186 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 BTNL3Q6UXE8 466 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 ADGRG3Q86Y34 549 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TMEM102Q8N9M5 508 aaPredicted RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TMED6Q8WW62 240 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 SLC7A6Q92536 515 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TAAR9Q96RI9 348 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 NRTNQ99748 197 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 UPK1AO00322 258 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 ZNF354AO60765 605 aaPredicted RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 SRPXP78539 464 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TRIP6Q15654 476 aaKnown RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 SLC35D3Q5M8T2 416 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 FAM109BQ6ICB4 259 aaPredicted RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 C17orf78Q8N4C9 275 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 NDFIP1Q9BT67 221 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 C19orf53Q9UNZ5 99 aaPredicted RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 M0QZ24 198 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 RTP5Q14D33 572 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 KTI12Q96EK9 354 aaPredicted RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 SLC25A32Q9H2D1 315 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TXNIPQ9H3M7 391 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 SERGEFQ9UGK8 458 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TRAPPC4Q9Y296 219 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 A0A0A6YYJ9 748 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 PTHLHP12272 177 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 PCK2Q16822 640 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 DHRS7BQ6IAN0 325 aaPredicted RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 SPRED1Q7Z699 444 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 UBE3DQ7Z6J8 389 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 OR2L13Q8N349 312 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 ZNF251Q9BRH9 671 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TNFRSF12AQ9NP84 129 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 TMEM30AQ9NV96 361 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 ICAM5Q9UMF0 924 aa12.42□□□□□ -0.42
VAPA-202ENST00000400000 RCL1Q9Y2P8 373 aaKnown RBP12.42□□□□□ -0.42
VAPA-202ENST00000400000 NDUFB3O43676 98 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 KRASP01116 189 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 SELENBP1Q13228 472 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 BTNL8Q6UX41 500 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 PRSS41Q7RTY9 318 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 CMTM4Q8IZR5 234 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 NANOGP1Q8N7R0 232 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 CDX2Q99626 313 aaPredicted RBP12.41□□□□□ -0.42
VAPA-202ENST00000400000 TMEM208Q9BTX3 173 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 TMEM38AQ9H6F2 299 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 AGFG2O95081 481 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 RAB1AP62820 205 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 YBX1P67809 324 aaKnown RBP12.41□□□□□ -0.42
VAPA-202ENST00000400000 FBXL4Q9UKA2 621 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 MYO7AQ13402 2215 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 PMS2P2O95744 297 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 TSPAN12O95859 305 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 FMODQ06828 376 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 LRRC10Q5BKY1 277 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 C1orf87Q8N0U7 546 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 SEH1LQ96EE3 360 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 ABHD14AQ9BUJ0 271 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 RSRP1Q9BUV0 290 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms