RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 PUS1Q9Y606 427 aaKnown RBP eCLIP8.81□□□□□ -1
PTCHD4-202ENST00000398738 TSPAN15O95858 294 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 S100A8P05109 93 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ARRB1P49407 418 aaPredicted RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 ASCL1P50553 236 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 EMP2P54851 167 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 RPS21P63220 83 aaKnown RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 TFF2Q03403 129 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 KCTD18Q6PI47 426 aaPredicted RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 DCXRQ7Z4W1 244 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ANGPTL5Q86XS5 388 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 WDSUB1Q8N9V3 476 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 PNLDC1Q8NA58 520 aaKnown RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 TM4SF19Q96DZ7 209 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 G6PC3Q9BUM1 346 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 RTN4RQ9BZR6 473 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 SLC2A4RGQ9NR83 387 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 TRIOO75962 3097 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 TICRRQ7Z2Z1 1910 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 OPN1LWP04000 364 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 RNF224P0DH78 156 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ZNF823P16415 610 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 RPS10P46783 165 aaKnown RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 ANKRD55Q3KP44 614 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 SLC25A43Q8WUT9 341 aaPredicted RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 LYRM4Q9HD34 91 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 PRTFDC1Q9NRG1 225 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 SLC5A6Q9Y289 635 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 HEBP2Q9Y5Z4 205 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 H0YIG0 161 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 H7C1Q1 480 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 HLA-DOBP13765 273 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 S100PP25815 95 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 OR3A2P47893 321 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 GAB4Q2WGN9 574 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ZNF260Q3ZCT1 412 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ATG4DQ86TL0 474 aaPredicted RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 SKA3Q8IX90 412 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ZNF561Q8N587 486 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 TCTEX1D2Q8WW35 142 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ADAM19Q9H013 955 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 OR51M1Q9H341 326 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 ELL3Q9HB65 397 aaPredicted RBP8.8□□□□□ -1
PTCHD4-202ENST00000398738 OR52A1Q9UKL2 312 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 PCOLCE2Q9UKZ9 415 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 CFAP54Q96N23 3096 aa8.8□□□□□ -1
PTCHD4-202ENST00000398738 SOCS1O15524 211 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 ASAH2BP0C7U1 165 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 ACKR3P25106 362 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 NDUFA6P56556 154 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 UNC119Q13432 240 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 ZNF141Q15928 474 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 MIDNQ504T8 468 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 FAM166AQ6J272 317 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 VHLLQ6RSH7 139 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 IL34Q6ZMJ4 242 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 ZNF565Q8N9K5 539 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 LRRC75AQ8NAA5 344 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 ASB13Q8WXK3 278 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 MMABQ96EY8 250 aaPredicted RBP8.79□□□□□ -1
PTCHD4-202ENST00000398738 GPER1Q99527 375 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 SLCO5A1Q9H2Y9 848 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 PDE7BQ9NP56 450 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 TMEM100Q9NV29 134 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 CYP8B1Q9UNU6 501 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 WIF1Q9Y5W5 379 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 OBSL1O75147 1896 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 PRUNE2Q8WUY3 3088 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 KIAA1549LQ6ZVL6 1849 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 PRSS37A4D1T9 235 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 F8VVB4 439 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 F8VWA3 439 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 SLC33A1O00400 549 aaPredicted RBP8.79□□□□□ -1
PTCHD4-202ENST00000398738 KLK3P07288 261 aaPredicted RBP8.79□□□□□ -1
PTCHD4-202ENST00000398738 OR8U8P0C7N1 319 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 VSIG8P0DPA2 414 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 LAP3P28838 519 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 GJA4P35212 333 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 KIR2DS3Q14952 304 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 OR2B11Q5JQS5 317 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 SOX7Q9BT81 388 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 C5orf66Q9H5L9 145 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 CERS4Q9HA82 394 aa8.79□□□□□ -1
PTCHD4-202ENST00000398738 A0A0A6YYH2 397 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 A0A1B0GTQ1 180 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 A6NJ64 397 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ZNF264O43296 627 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 PNMTP11086 282 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 AMY2BP19961 511 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 GSK3AP49840 483 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 RAB2AP61019 212 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 IAH1Q2TAA2 248 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 C10orf91Q5T1B1 145 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 TANGO2Q6ICL3 276 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 SLC43A2Q8N370 569 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 NAXEQ8NCW5 288 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 TERB2Q8NHR7 220 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 RSC1A1Q92681 617 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 PIGQQ9BRB3 760 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms