RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ZFP3Q96NJ6 502 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 NEDD4LQ96PU5 975 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 RBP7Q96R05 134 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 GFM1Q96RP9 751 aaKnown RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 RAB11FIP5Q9BXF6 653 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC46A2Q9BY10 475 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 CHRNA10Q9GZZ6 450 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 C20orf85Q9H1P6 137 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 RERGLQ9H628 205 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 TVP23BQ9NYZ1 205 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 UFC1Q9Y3C8 167 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 B3GALT1Q9Y5Z6 326 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 A0A087WV48 116 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TRAV19A0A0A6YYK7 116 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 M0QZ24 198 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 WDR1O75083 606 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 KLK1P06870 262 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 IMPA1P29218 277 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 CSF2RBP32927 897 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 UQCRFS1P47985 274 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PCBP3P57721 371 aaKnown RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TBPL1P62380 186 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PRTGQ2VWP7 1150 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 H3F3CQ6NXT2 135 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 KLHDC8AQ8IYD2 350 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 NEIL2Q969S2 332 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 MED28Q9H204 178 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 CST9LQ9H4G1 147 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC25A19Q9HC21 320 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 HCSTQ9UBK5 93 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 MUTYHQ9UIF7 546 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PIGLQ9Y2B2 252 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 V9GYH0 126 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 LOC105371242A0A075B767 164 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TRBV4-1A0A0J9YWV2 114 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 A0A1W2PR48 441 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 OR6C6A6NF89 314 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 ANKRD30BLA7E2S9 258 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 THY1P04216 161 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 BCHEP06276 602 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 HOXB5P09067 269 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC2A2P11168 524 aaPredicted RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 HOXA5P20719 270 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 F2RP25116 425 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 GABRR2P28476 465 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 CRYBB2P43320 205 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 MAP2K3P46734 347 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 MVDP53602 400 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 RUNX2Q13950 521 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 FGFBP1Q14512 234 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PEA15Q15121 130 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM176BQ3YBM2 270 aaPredicted RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF648Q5T619 568 aaPredicted RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 HIST2H3PS2Q5TEC6 136 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM71E1Q6IPT2 247 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PRR27Q6MZM9 219 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TNFAIP8L2Q6P589 184 aaPredicted RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM107Q6UX40 140 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 Q6ZVL8 140 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 MS4A15Q8N5U1 240 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 OR5P2Q8WZ92 322 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SMIM8Q96KF7 97 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 VSTM2LQ96N03 204 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 LMF2Q9BU23 707 aaKnown RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 DPCDQ9BVM2 203 aaPredicted RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 MMP28Q9H239 520 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 ICAM5Q9UMF0 924 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PPIAL4EA0A075B759 164 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PPIAL4CA0A0B4J2A2 164 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM218A2RU14 115 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 C1QTNF9BB2RNN3 333 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 D6RAR5 112 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PPIAL4DF5H284 164 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 CASKO14936 926 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TPST2O60704 377 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SEMA7AO75326 666 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SNAPC5O75971 98 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 IL3P08700 152 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 PPIAL4FP0DN26 164 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 FCGR2BP31994 310 aaPredicted RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 BCL6P41182 706 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 ERVK11-1P61568 191 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 BTN3A2P78410 334 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 EFNB1P98172 346 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 WDR25Q64LD2 544 aaPredicted RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 ASPHD2Q6ICH7 369 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SYS1Q8N2H4 156 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 LRRC75AQ8NAA5 344 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 MRPS24Q96EL2 167 aaKnown RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 OR2M4Q96R27 311 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 OR4K3Q96R72 315 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 DPH1Q9BZG8 443 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SRMSQ9H3Y6 488 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 LANCL2Q9NS86 450 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 FGF21Q9NSA1 209 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 GPATCH2Q9NW75 528 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 TXNL4BQ9NX01 149 aaKnown RBP5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC35A3Q9Y2D2 325 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 EXOSC1Q9Y3B2 195 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms