RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 HNRNPA0Q13151 305 aaKnown RBP23.77■■□□□ 1.4
CPNE1-203ENST00000397442 SEZ6L2Q6UXD5 910 aa23.77■■□□□ 1.4
CPNE1-203ENST00000397442 LRRTM1Q86UE6 522 aa23.77■■□□□ 1.4
CPNE1-203ENST00000397442 GFI1Q99684 422 aa23.77■■□□□ 1.4
CPNE1-203ENST00000397442 RGCCQ9H4X1 137 aa23.77■■□□□ 1.4
CPNE1-203ENST00000397442 HIVEP3Q5T1R4 2406 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 IGHV1-18A0A0C4DH31 117 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 A6NIN4 97 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 DHRS3O75911 302 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 IGFBP3P17936 291 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-203ENST00000397442 ADRA2CP18825 462 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 FSTP19883 344 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 ASCL1P50553 236 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 TNK1Q13470 666 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 PPA1Q15181 289 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 CDSNQ15517 529 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 C1QTNF12Q5T7M4 302 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 LILRB4Q8NHJ6 448 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 NXF2Q9GZY0 626 aaKnown RBP23.76■■□□□ 1.39
CPNE1-203ENST00000397442 TCF7L1Q9HCS4 588 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 TBCCD1Q9NVR7 557 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 COQ3Q9NZJ6 369 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 NPAP1Q9NZP6 1156 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 PLEKHB1Q9UF11 243 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF391Q9UJN7 358 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 STARD10Q9Y365 291 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 LOC390937A0A1W2PQ73 354 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 XRCC2O43543 280 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 FBXL19-AS1Q494R0 122 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 RFPL4BQ6ZWI9 263 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 MUCL1Q96DR8 90 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 USB1Q9BQ65 265 aaKnown RBP23.76■■□□□ 1.39
CPNE1-203ENST00000397442 OR10A4Q9H209 315 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 TAS2R4Q9NYW5 299 aa23.76■■□□□ 1.39
CPNE1-203ENST00000397442 ERRFI1Q9UJM3 462 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-203ENST00000397442 EPXP11678 715 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF35P13682 527 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF12P17014 697 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 RAB3BP20337 219 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 SOX6P35712 828 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 POFUT1Q9H488 388 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 CDH20Q9HBT6 801 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 MOV10Q9HCE1 1003 aaKnown RBP23.75■■□□□ 1.39
CPNE1-203ENST00000397442 FOXJ3Q9UPW0 622 aa23.75■■□□□ 1.39
CPNE1-203ENST00000397442 AK6Q9Y3D8 172 aaKnown RBP23.75■■□□□ 1.39
CPNE1-203ENST00000397442 hCG_38984A0A1B0GV85 526 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 B8ZZF3 427 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 CLPXO76031 633 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 ACKR3P25106 362 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 PRSS12P56730 875 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 FAM3AP98173 230 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF404Q494X3 552 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 C4orf17Q53FE4 359 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 SERPINA12Q8IW75 414 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 CCDC54Q8NEL0 328 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 ZCCHC4Q9H5U6 513 aa23.74■■□□□ 1.39
CPNE1-203ENST00000397442 DIDO1Q9BTC0 2240 aaKnown RBP23.74■■□□□ 1.39
CPNE1-203ENST00000397442 MTRF1O75570 445 aaKnown RBP23.73■■□□□ 1.39
CPNE1-203ENST00000397442 PAX7P23759 505 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 GK2Q14410 553 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-203ENST00000397442 C3orf36Q3SXR2 165 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF529Q6P280 563 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 AKAP1Q92667 903 aaKnown RBP eCLIP23.73■■□□□ 1.39
CPNE1-203ENST00000397442 SLITRK2Q9H156 845 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 FAM90A27PA6NNH2 459 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 SMPD2O60906 423 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 MAS1P04201 325 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 DDOSTP39656 456 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF83P51522 516 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 LSAMPQ13449 338 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 OR51A2Q8NGJ7 313 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 MCFD2Q8NI22 146 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 REPIN1Q9BWE0 567 aaKnown RBP23.73■■□□□ 1.39
CPNE1-203ENST00000397442 OR51B6Q9H340 312 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 A3GALT2U3KPV4 340 aa23.73■■□□□ 1.39
CPNE1-203ENST00000397442 DHRS7CA6NNS2 312 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 J3QW42 95 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF20P17024 532 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 GSK3AP49840 483 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 OR8B8Q15620 311 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 SFXN4Q6P4A7 337 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 ZNF843Q8N446 348 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 CKLFQ9UBR5 152 aa23.72■■□□□ 1.39
CPNE1-203ENST00000397442 IGHV2OR16-5A0A0B4J2B6 119 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 NKX2-6A6NCS4 301 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 C1QL1O75973 258 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 FAHP16930 419 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 GNALP38405 381 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 HLXQ14774 488 aaPredicted RBP23.71■■□□□ 1.39
CPNE1-203ENST00000397442 ALKBH2Q6NS38 261 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 TBC1D15Q8TC07 691 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 TSC22D3Q99576 134 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 PLEKHA1Q9HB21 404 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 PTTG3PQ9NZH4 202 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 EIF3KQ9UBQ5 218 aaKnown RBP23.71■■□□□ 1.39
CPNE1-203ENST00000397442 PIGLQ9Y2B2 252 aa23.71■■□□□ 1.39
CPNE1-203ENST00000397442 NOTOA8MTQ0 251 aa23.7■■□□□ 1.39
CPNE1-203ENST00000397442 PDCD5O14737 125 aa23.7■■□□□ 1.39
CPNE1-203ENST00000397442 THBDP07204 575 aa23.7■■□□□ 1.39
CPNE1-203ENST00000397442 CALCRP30988 508 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms