RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 DECR2Q9NUI1 292 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 LHFPL6Q9Y693 200 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 MALRD1Q5VYJ5 2156 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 SLC22A31A6NKX4 558 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 LYNX1G3V0Z9 82 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 M0R129 80 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 CCRL2O00421 344 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 TFP02787 698 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 LYNX1P0DP58 116 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 COL8A2P25067 703 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 MAGEB1P43366 347 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
SEC13-208ENST00000397109 MMP15P51511 669 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 CCL8P80075 99 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 ECH1Q13011 328 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 MLLT11Q13015 90 aaPredicted RBP12.41□□□□□ -0.42
SEC13-208ENST00000397109 SPHARQ15513 63 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 OTPQ5XKR4 325 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 CYB561A3Q8NBI2 242 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 OR52I1Q8NGK6 324 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 OR5L1Q8NGL2 311 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 HPS1Q92902 700 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 LGALS12Q96DT0 336 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 DIRC2Q96SL1 478 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 TMEM160Q9NX00 188 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 HAO2Q9NYQ3 351 aa12.41□□□□□ -0.42
SEC13-208ENST00000397109 PRR23D1E9PI22 279 aaPredicted RBP12.4□□□□□ -0.42
SEC13-208ENST00000397109 MYL12BO14950 172 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 TPD52L2O43399 206 aaKnown RBP12.4□□□□□ -0.42
SEC13-208ENST00000397109 TIMM8AO60220 97 aaPredicted RBP12.4□□□□□ -0.42
SEC13-208ENST00000397109 LILRA1O75019 489 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 NCR1O76036 304 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 ADH4P08319 380 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 PRR23D2P0DMB1 279 aaPredicted RBP12.4□□□□□ -0.42
SEC13-208ENST00000397109 ZNF823P16415 610 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 TGFBR2P37173 567 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 SERPINB10P48595 397 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 MED22Q15528 200 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 SLC18B1Q6NT16 456 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 CORO6Q6QEF8 472 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 CXXC5Q7LFL8 322 aaKnown RBP12.4□□□□□ -0.42
SEC13-208ENST00000397109 OR9Q1Q8NGQ5 310 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 SLC7A6Q92536 515 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 RNFT2Q96EX2 444 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 HCAR1Q9BXC0 346 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 EGLN1Q9GZT9 426 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 INPP5EQ9NRR6 644 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 CYB5R1Q9UHQ9 305 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 LSM2Q9Y333 95 aaKnown RBP12.4□□□□□ -0.42
SEC13-208ENST00000397109 STARD10Q9Y365 291 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 ABCA2Q9BZC7 2435 aa12.4□□□□□ -0.42
SEC13-208ENST00000397109 FAM183AA6NL82 134 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 AIREO43918 545 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 SPI1P17947 270 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 KITLGP21583 273 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 SLC2A5P22732 501 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 PYCR1P32322 319 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 CRYBB2P43320 205 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 ACSM1Q08AH1 577 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 POU4F2Q12837 409 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 PSG7Q13046 419 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 TSTQ16762 297 aaKnown RBP12.4□□□□□ -0.43
SEC13-208ENST00000397109 DGUOKQ16854 277 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 FAM166AQ6J272 317 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 PLBD1Q6P4A8 553 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 MEPCEQ7L2J0 689 aaKnown RBP12.4□□□□□ -0.43
SEC13-208ENST00000397109 EGFL6Q8IUX8 553 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 CPOQ8IVL8 374 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 YIPF5Q969M3 257 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 APOBEC3DQ96AK3 386 aaPredicted RBP12.4□□□□□ -0.43
SEC13-208ENST00000397109 HAVCR1Q96D42 359 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 ELMOD3Q96FG2 381 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.43
SEC13-208ENST00000397109 ZNF275Q9NSD4 429 aaPredicted RBP12.4□□□□□ -0.43
SEC13-208ENST00000397109 IGHV1-69-2A0A0G2JMI3 117 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 LOC100289279A0A1B0GTE1 492 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 LRP5LA4QPB2 252 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 PPIHO43447 177 aaKnown RBP12.39□□□□□ -0.43
SEC13-208ENST00000397109 SPRY3O43610 288 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 LMX1BO60663 402 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 RP2O75695 350 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 IGHV1-46P01743 117 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 IGHA1P01876 353 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 DBHP09172 617 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 RAC2P15153 192 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 PSMA1P25786 263 aaKnown RBP12.39□□□□□ -0.43
SEC13-208ENST00000397109 BLVRAP53004 296 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 WNT4P56705 351 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 SLC35D3Q5M8T2 416 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 LINC01590Q5TEZ4 76 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 CMBLQ96DG6 245 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 MSI2Q96DH6 328 aaKnown RBP12.39□□□□□ -0.43
SEC13-208ENST00000397109 ATF6BQ99941 703 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 MRPL22Q9NWU5 206 aaKnown RBP12.39□□□□□ -0.43
SEC13-208ENST00000397109 PURGQ9UJV8 347 aaKnown RBP12.39□□□□□ -0.43
SEC13-208ENST00000397109 CDC42EP3Q9UKI2 254 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 KCNS2Q9ULS6 477 aa12.39□□□□□ -0.43
SEC13-208ENST00000397109 A3GALT2U3KPV4 340 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms