RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 RPL4P36578 427 aaKnown RBP6.85□□□□□ -1.31
SCFD1-202ENST00000396629 OR1E2P47887 323 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 IDH3AP50213 366 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 PCK2Q16822 640 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 WDR38Q5JTN6 314 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 HCP5Q6MZN7 132 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 SLC36A1Q7Z2H8 476 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 MRPL21Q7Z2W9 205 aaKnown RBP6.85□□□□□ -1.31
SCFD1-202ENST00000396629 NRMQ8IXM6 262 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 C11orf53Q8IXP5 236 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 OR10A6Q8NH74 314 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 SYT4Q9H2B2 425 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 CENPHQ9H3R5 247 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 NMNAT1Q9HAN9 279 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-202ENST00000396629 MRPL15Q9P015 296 aaKnown RBP6.85□□□□□ -1.31
SCFD1-202ENST00000396629 RPS6KA6Q9UK32 745 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 POLR1DQ9Y2S0 133 aa6.85□□□□□ -1.31
SCFD1-202ENST00000396629 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
SCFD1-202ENST00000396629 TMEM120BA0PK00 339 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 NDUFB3O43676 98 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 LCATP04180 440 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 AMY2BP19961 511 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 SLC18A1P54219 525 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 MZT1Q08AG7 82 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 EGFEM1PQ0D2K5 195 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 ECH1Q13011 328 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 KRR1Q13601 381 aaKnown RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 MEP1BQ16820 701 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 MICBQ29980 383 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 ZBED5Q49AG3 693 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 ATPAF1Q5TC12 328 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 CORO6Q6QEF8 472 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 RNF113BQ8IZP6 322 aaKnown RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 FAM216BQ8N7L0 139 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 OR51G2Q8NGK0 314 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 PRRC1Q96M27 445 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 EBF4Q9BQW3 602 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 WNT10AQ9GZT5 417 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 NUAK2Q9H093 628 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 RERGLQ9H628 205 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 METTL8Q9H825 291 aaKnown RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 RNPEPL1Q9HAU8 725 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 SF3B6Q9Y3B4 125 aaKnown RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 hCG_1807616A0A1W2PRN6 198 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 A6NLC8 198 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 F5H5K5 113 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 CDC42EP2O14613 210 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 ACOT8O14734 319 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 SDHAP31040 664 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 TRAP1Q12931 704 aaKnown RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 HABP2Q14520 560 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 GPR139Q6DWJ6 353 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 SLC18B1Q6NT16 456 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 CFAP77Q6ZQR2 320 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 PTCHD4Q6ZW05 846 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 TMPRSS11FQ6ZWK6 438 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 RCC1LQ96I51 464 aaKnown RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 PNRC2Q9NPJ4 139 aaKnown RBP6.84□□□□□ -1.31
SCFD1-202ENST00000396629 C14orf119Q9NWQ9 140 aa6.84□□□□□ -1.31
SCFD1-202ENST00000396629 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-202ENST00000396629 GGT3PA6NGU5 568 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 C3orf84H3BNL1 204 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 PTP4A3O75365 173 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 GRK5P34947 590 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 MDH1P40925 334 aaKnown RBP6.83□□□□□ -1.32
SCFD1-202ENST00000396629 ZNF92Q03936 586 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 LRRC10Q5BKY1 277 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 TSEN54Q7Z6J9 526 aaKnown RBP6.83□□□□□ -1.32
SCFD1-202ENST00000396629 ADCK1Q86TW2 530 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 OFCC1Q8IZS5 231 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 LRRC29Q8WV35 223 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 C12orf43Q96C57 262 aaKnown RBP6.83□□□□□ -1.32
SCFD1-202ENST00000396629 GPX7Q96SL4 187 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-202ENST00000396629 DDOQ99489 341 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 PITX2Q99697 317 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 ATF6BQ99941 703 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 DNTTIP1Q9H147 329 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 NRIP3Q9NQ35 241 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 A0A087WUU8 490 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 IGLV1-36A0A0B4J1U3 117 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 E9PQ18 207 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 DCTN6O00399 190 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 DUS4LO95620 317 aaKnown RBP6.83□□□□□ -1.32
SCFD1-202ENST00000396629 TXNDC12O95881 172 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 IFNA14P01570 189 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 CRABP1P29762 137 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 IFNA8P32881 189 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 GGT2P36268 569 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 CDKN2AP42771 156 aaKnown RBP6.83□□□□□ -1.32
SCFD1-202ENST00000396629 GPR4P46093 362 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 BMXP51813 675 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 TPTEP56180 551 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 SLC35A2P78381 396 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 CD83Q01151 205 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 IKZF1Q13422 519 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 NFYCQ13952 458 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 TRAM2Q15035 370 aa6.83□□□□□ -1.32
SCFD1-202ENST00000396629 STUMQ69YW2 141 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms