RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RAP1AP62834 184 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 EBPQ15125 230 aaKnown RBP11.83□□□□□ -0.51
TRIM40-207ENST00000396581 PRSS54Q6PEW0 395 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 POMZP3Q6PJE2 187 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 DNM1P34Q6PK57 102 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 GRINAQ7Z429 371 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 PEG10Q86TG7 708 aaKnown RBP11.83□□□□□ -0.51
TRIM40-207ENST00000396581 TMEM151BQ8IW70 566 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 PRR22Q8IZ63 422 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 MARCH1Q8TCQ1 289 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 ELP5Q8TE02 316 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 TMED6Q8WW62 240 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 WNT2BQ93097 391 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 FGGYQ96C11 551 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 DNAJA3Q96EY1 480 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 NRIP2Q9BQI9 281 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 RNF122Q9H9V4 155 aa11.83□□□□□ -0.51
TRIM40-207ENST00000396581 PNO1Q9NRX1 252 aaKnown RBP11.83□□□□□ -0.51
TRIM40-207ENST00000396581 RCC2Q9P258 522 aaKnown RBP11.83□□□□□ -0.51
TRIM40-207ENST00000396581 COL5A1P20908 1838 aaPredicted RBP11.83□□□□□ -0.52
TRIM40-207ENST00000396581 OR2T1O43869 369 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 TTRP02766 147 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 IFNA6P05013 189 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 CHRM2P08172 466 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 TDGF1P13385 188 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 FOLR2P14207 255 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 CAV2P51636 162 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 IL15RAQ13261 267 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 SGCAQ16586 387 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 DEFB133Q30KQ1 61 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 ACTBL2Q562R1 376 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 ARRDC1Q8N5I2 433 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 METTL27Q8N6F8 245 aaPredicted RBP11.83□□□□□ -0.52
TRIM40-207ENST00000396581 CHST4Q8NCG5 386 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 NUBPLQ8TB37 319 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 GPR119Q8TDV5 335 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 ASB10Q8WXI3 467 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 KCNK17Q96T54 332 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 ZNF768Q9H5H4 540 aaKnown RBP11.83□□□□□ -0.52
TRIM40-207ENST00000396581 C5orf66Q9H5L9 145 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 KIF26BQ2KJY2 2108 aa11.83□□□□□ -0.52
TRIM40-207ENST00000396581 C13orf42A0A1B0GVH6 325 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 ADAM10O14672 748 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 APOC1P02654 83 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 GSTP1P09211 210 aaKnown RBP11.82□□□□□ -0.52
TRIM40-207ENST00000396581 HLA-DOBP13765 273 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 IL12BP29460 328 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 MEOX2P50222 304 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 AKR1D1P51857 326 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 C14orf28Q4W4Y0 310 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 AVPI1Q5T686 147 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 NSUN5P2Q63ZY6 315 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 TMPPEQ6ZT21 453 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 C9orf40Q8IXQ3 194 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 OR4K15Q8NH41 348 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 ADAT3Q96EY9 351 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-207ENST00000396581 OR8D2Q9GZM6 311 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 CHRNA10Q9GZZ6 450 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 PTGES2Q9H7Z7 377 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 PDE7BQ9NP56 450 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 DNAJB11Q9UBS4 358 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 ARID1BQ8NFD5 2236 aaPredicted RBP11.82□□□□□ -0.52
TRIM40-207ENST00000396581 THADAQ6YHU6 1953 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 MS4A18H0YCH9 400 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 GMFGO60234 142 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 AHSA1O95433 338 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 PMP2P02689 132 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 CRYBA1P05813 215 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 SPP1P10451 314 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 ABCD3P28288 659 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 CLDN6P56747 220 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 SQSTM1Q13501 440 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 GFOD2Q3B7J2 385 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 MS4A18Q3C1V0 323 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 SLC25A45Q8N413 288 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 EGLN1Q9GZT9 426 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 SLC5A7Q9GZV3 580 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 RAB33BQ9H082 229 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 LPAR5Q9H1C0 372 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 WIF1Q9Y5W5 379 aa11.82□□□□□ -0.52
TRIM40-207ENST00000396581 MYO15AQ9UKN7 3530 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 TECTAO75443 2155 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 TMEM150CB9EJG8 249 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 NUDT14O95848 222 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 F12P00748 615 aaPredicted RBP11.81□□□□□ -0.52
TRIM40-207ENST00000396581 H2BFMP0C1H6 154 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 MUC1P15941 1255 aaPredicted RBP11.81□□□□□ -0.52
TRIM40-207ENST00000396581 FPR2P25090 351 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 SUPT4H1P63272 117 aaKnown RBP11.81□□□□□ -0.52
TRIM40-207ENST00000396581 ELAVL1Q15717 326 aaKnown RBP11.81□□□□□ -0.52
TRIM40-207ENST00000396581 CLEC18BQ6UXF7 455 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 NAA40Q86UY6 237 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 WDR5BQ86VZ2 330 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 LHFPL1Q86WI0 220 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 LINC00346Q8IVM7 164 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 OR5D14Q8NGL3 314 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
TRIM40-207ENST00000396581 C1orf147Q96MC9 270 aaPredicted RBP11.81□□□□□ -0.52
TRIM40-207ENST00000396581 TBL1XR1Q9BZK7 514 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms