RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 GIPC3Q8TF64 312 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 RNF133Q8WVZ7 376 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 RNF166Q96A37 237 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-205ENST00000394892 KCNJ15Q99712 375 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 ABHD6Q9BV23 337 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 REEP1Q9H902 201 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 CENPMQ9NSP4 180 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 A0A1B0GW55 424 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 ARRDC5A6NEK1 342 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 AQP12BA6NM10 295 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DYNC1I1O14576 645 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 KCNAB3O43448 404 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 SELENOFO60613 162 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4L2P0CJ85 424 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4L3P0CJ86 424 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4L4P0CJ87 422 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4L5P0CJ88 424 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4L6P0CJ89 424 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4L7P0CJ90 424 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 AMY2BP19961 511 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 SLC2A5P22732 501 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 GATA3P23771 443 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 FPR2P25090 351 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 PSMB10P40306 273 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 HCCSP53701 268 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 UBA52P62987 128 aaKnown RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 FAM3AP98173 230 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 CDK5Q00535 292 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 POU4F2Q12837 409 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 FOXL1Q12952 345 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 GINS1Q14691 196 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 PRR31Q5SQ13 230 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 WDR25Q64LD2 544 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4L9Q6RFH8 374 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 RBMS3Q6XE24 437 aaKnown RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 TRPM8Q7Z2W7 1104 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 MRPL21Q7Z2W9 205 aaKnown RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 AQP12AQ8IXF9 295 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 KLHL36Q8N4N3 616 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 CELF2-AS1Q8N7Q2 184 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 SIGLECL1Q8N7X8 197 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 OR6K6Q8NGW6 343 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 NANPQ8TBE9 248 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 SPTSSAQ969W0 71 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 SEH1LQ96EE3 360 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 LYZL4Q96KX0 146 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 COPS4Q9BT78 406 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 CADM1Q9BY67 442 aaKnown RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 SMURF1Q9HCE7 757 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 PDP1Q9P0J1 537 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-205ENST00000394892 DUX4Q9UBX2 424 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 BAIAP2Q9UQB8 552 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 PPIAL4AQ9Y536 164 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 N6AMT1Q9Y5N5 214 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 AUP1Q9Y679 476 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 TANC2Q9HCD6 1990 aa7.37□□□□□ -1.23
ATG4A-205ENST00000394892 IGHV2-70DA0A0C4DH43 119 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 KIR2DS1A0A191URI9 304 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 hCG_38984A0A1B0GV85 526 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 CCDC182A6NF36 153 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 IFNL4K9M1U5 179 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 FKBP6O75344 327 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 GLCEO94923 617 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 LHBP01229 141 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 RPS2P15880 293 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 ACKR3P25106 362 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 POU1F1P28069 291 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 EPHA2P29317 976 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 GSTT1P30711 240 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 CX3CR1P49238 355 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF121P58317 390 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 MALLQ13021 153 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 EIF2B1Q14232 305 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 OR8G1Q15617 311 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 ESCO2Q56NI9 601 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 AWAT1Q58HT5 328 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 SFRP4Q6FHJ7 346 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 PLBD1Q6P4A8 553 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 DOK3Q7L591 496 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 SLC16A9Q7RTY1 509 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 BCDIN3DQ7Z5W3 292 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 ERI1Q8IV48 349 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 CPOQ8IVL8 374 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 MUC20Q8N307 709 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 GCSAMQ8N6F7 178 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 OR6N2Q8NGY6 317 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 SPRYD4Q8WW59 207 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 RAB40AQ8WXH6 277 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 POP5Q969H6 163 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 UTP4Q969X6 686 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 NEIL1Q96FI4 390 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 DUX5Q96PT3 197 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 INTS14Q96SY0 518 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 ADAT1Q9BUB4 502 aaKnown RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 SSBP3Q9BWW4 388 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-205ENST00000394892 OR51V1Q9H2C8 321 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 RASSF4Q9H2L5 321 aa7.36□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF696Q9H7X3 374 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms