RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 BBS1Q8NFJ9 593 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 OR9K2Q8NGE7 335 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 OR51D1Q8NGF3 324 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ZNF417Q8TAU3 575 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ZG16BQ96DA0 208 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 AP1S3Q96PC3 154 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SIGLEC11Q96RL6 698 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 NRIP2Q9BQI9 281 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 REG4Q9BYZ8 158 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SELENOIQ9C0D9 397 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 OPN3Q9H1Y3 402 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 ZMAT3Q9HA38 289 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 PARPBPQ9NWS1 579 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 MRPL22Q9NWU5 206 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 PPP1R14DQ9NXH3 145 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SLCO1C1Q9NYB5 712 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 LSM2Q9Y333 95 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 AUP1Q9Y679 476 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 V9GYS6 101 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 LOC390937A0A1W2PQ73 354 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 C20orf202A1L168 122 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PRAMEF25A6NGN4 478 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 TCF21O43680 179 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SMIM10L1P0DMW3 83 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 CD37P11049 281 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SERPINA2P20848 420 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 TBXA2RP21731 343 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 HTR2CP28335 458 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GALNSP34059 522 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ATP1B3P54709 279 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 DVL1P1P54792 670 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 GNMTQ14749 295 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 CARD17Q5XLA6 110 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 DPY19L2P2Q6ZN68 376 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 EIF4E3Q8N5X7 224 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 OR5T1Q8NG75 326 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 OR4C15Q8NGM1 316 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PFN4Q8NHR9 129 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SMIM10Q96HG1 83 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 FER1L6-AS2Q96M78 137 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PACRGQ96M98 296 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 TAAR9Q96RI9 348 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ATG101Q9BSB4 218 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 MENTQ9BUN1 341 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 WWTR1Q9GZV5 400 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PLEKHA1Q9HB21 404 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 C19orf12Q9NSK7 152 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ZNF281Q9Y2X9 895 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 LTBP2Q14767 1821 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 A0A1W2PPE2 198 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 DCDC2BA2VCK2 349 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 IFITM5A6NNB3 132 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 A8MVM7 634 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 FAM171A2A8MVW0 826 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SLC2A10O95528 541 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 F13BP05160 661 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 AVPR2P30518 371 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 EMDP50402 254 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PTTG1IPP53801 180 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SNRPNP63162 240 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 BDH1Q02338 343 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GAMTQ14353 236 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GPR157Q5UAW9 335 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PRAMEF20Q5VT98 475 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 PWWP2BQ6NUJ5 590 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GRINAQ7Z429 371 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 HSD17B11Q8NBQ5 300 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 FAM131CQ96AQ9 280 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ORAI1Q96D31 301 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 MALSU1Q96EH3 234 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SLC25A44Q96H78 314 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 IGHV5-10-1A0A0J9YXX1 117 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 C2orf72A6NCS6 295 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 OR5H15A6NDH6 313 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 OR5H1A6NKK0 313 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 H2BFMP0C1H6 154 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 CSNK2A1P68400 391 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 H3F3AP84243 136 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 TLE4Q04727 773 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 KLF9Q13886 244 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 MOGAT2Q3SYC2 334 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 LIPNQ5VXI9 398 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 OR11G2Q8NGC1 345 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GPR148Q8TDV2 347 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GTF3AQ92664 365 aaKnown RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 HIST1H2BAQ96A08 127 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 TMEM18Q96B42 140 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 SLC41A2Q96JW4 573 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GUCD1Q96NT3 240 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 TXN2Q99757 166 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 DHDHQ9UQ10 334 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 GPR55Q9Y2T6 319 aaPredicted RBP5.12□□□□□ -1.59
RFFL-202ENST00000394597 PCDHGA5Q9Y5G8 931 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 ETV7Q9Y603 341 aa5.12□□□□□ -1.59
RFFL-202ENST00000394597 CCDC187A0A096LP49 1063 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 FAM230AA0A1W2PPH8 454 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 DNAJB6O75190 326 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 OPN1LWP04000 364 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 CST2P09228 141 aa5.11□□□□□ -1.59
RFFL-202ENST00000394597 MMP7P09237 267 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms