RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SOX1O00570 391 aaPredicted RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 BNIP3LO60238 219 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 HMGN2P05204 90 aaKnown RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 GZMHP20718 246 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 H3F3AP84243 136 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 ELOA3BQ3SY89 546 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 TOMM20LQ6UXN7 152 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 DLK2Q6UY11 383 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 Q6ZVU0 165 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 RTN4RL2Q86UN3 420 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 LINC01555Q8NAE3 123 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 ELOA3Q8NG57 546 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 SUN3Q8TAQ9 357 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 IL22RA2Q969J5 263 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 TOMM40LQ969M1 308 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 GPR62Q9BZJ7 368 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 LSM5Q9Y4Y9 91 aaKnown RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 TRIP12Q14669 1992 aaPredicted RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF831Q5JPB2 1677 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 VCANP13611 3396 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 A0A1W2PS29 197 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 TLCD2A6NGC4 264 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 K7EP13 123 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 CDC40O60508 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 STATHP02808 62 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 DANCRP0C864 163 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 LAMP2P13473 410 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 AK4P27144 223 aaPredicted RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 IMPA1P29218 277 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 OAZ1P54368 228 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 CYCSP99999 105 aaKnown RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 ZP2Q05996 745 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 MRPL58Q14197 206 aaKnown RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 GAS6Q14393 721 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 ZNF260Q3ZCT1 412 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 HIKESHIQ53FT3 197 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 NUP54Q7Z3B4 507 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 WFDC8Q8IUA0 241 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 ARL14EPQ8N8R7 260 aaPredicted RBP11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 TVP23CQ96ET8 276 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 CABLES2Q9BTV7 478 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 GREB1Q4ZG55 1949 aa11.2□□□□□ -0.62
SLC28A1-203ENST00000394573 HEATR5BQ9P2D3 2071 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 A0A1W2PN81 502 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 FAM221AA4D161 298 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 F5H5T6 163 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 GPRIN2O60269 458 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 SLCO2B1O94956 709 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 C8orf89P0DMQ9 161 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 TDGF1P13385 188 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 CHRNA7P36544 502 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 RND3P61587 244 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 ANKRD55Q3KP44 614 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 CHRFAM7AQ494W8 412 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 GXYLT1Q4G148 440 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 OR2AJ1Q8NGZ0 328 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 OR5AK2Q8NH90 309 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 GPR119Q8TDV5 335 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 CYYR1Q96J86 154 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 CLDND1Q9NY35 253 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 C4orf47A7E2U8 309 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 JTBO76095 146 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 B3GAT3O94766 335 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 CTSBP07858 339 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 OR5G3P0C626 314 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 OR2T7P0C7T2 308 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 BCKDHBP21953 392 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 RHOAP61586 193 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 PLAURQ03405 335 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 SYS1Q8N2H4 156 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 COX18Q8N8Q8 333 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 OR4C5Q8NGB2 326 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 OR51A2Q8NGJ7 313 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 OR2T27Q8NH04 317 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 ZPLD1Q8TCW7 415 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 PRRT1Q99946 306 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 MIEN1Q9BRT3 115 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 CUTCQ9NTM9 273 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 CGGBP1Q9UFW8 167 aaPredicted RBP11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 ICKQ9UPZ9 632 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 DYRK1BQ9Y463 629 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 BRWD3Q6RI45 1802 aa11.19□□□□□ -0.62
SLC28A1-203ENST00000394573 A0A087WWC5 75 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 TRBV5-4A0A0C4DH59 114 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 CENPVL1A0A0U1RR11 272 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 RBFOX3A6NFN3 312 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 RHOCP08134 193 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 APOBEC1P41238 236 aaKnown RBP11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 CST9LP1Q5W188 147 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 CLEC18BQ6UXF7 455 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 TMEM86AQ8N2M4 240 aa11.18□□□□□ -0.62
SLC28A1-203ENST00000394573 TMEM156Q8N614 296 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms