RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GPR61Q9BZJ8 451 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 HRASLS2Q9NWW9 162 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 PRODH2Q9UF12 536 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 MTCH2Q9Y6C9 303 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 MBP02144 154 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 SLC35E2P0CK97 266 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 LSSP48449 732 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 EGR3Q06889 387 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 TMEM128Q5BJH2 165 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 FDX2Q6P4F2 183 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 GRHL3Q8TE85 626 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 HOXB13Q92826 284 aaPredicted RBP16.84■□□□□ 0.29
HOXC6-202ENST00000394331 PBDC1Q9BVG4 233 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 TRIM2Q9C040 744 aa16.84■□□□□ 0.29
HOXC6-202ENST00000394331 GUSBP08236 651 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 EN2P19622 333 aaPredicted RBP16.83■□□□□ 0.29
HOXC6-202ENST00000394331 THBS4P35443 961 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 RAB38P57729 211 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 PPA1Q15181 289 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 MIDNQ504T8 468 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 LINC00114Q6XXX2 140 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 MDGA2Q7Z553 956 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 CDC20BQ86Y33 519 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 ANKRD9Q96BM1 317 aaPredicted RBP16.83■□□□□ 0.29
HOXC6-202ENST00000394331 ARV1Q9H2C2 271 aa16.83■□□□□ 0.29
HOXC6-202ENST00000394331 A0A1B0GWA3 101 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 NGFRP08138 427 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 AKR1C4P17516 323 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 CHATP28329 748 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 ID4P47928 161 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 SUCLG1P53597 346 aaKnown RBP16.83■□□□□ 0.28
HOXC6-202ENST00000394331 EBPQ15125 230 aaKnown RBP16.83■□□□□ 0.28
HOXC6-202ENST00000394331 AVL9Q8NBF6 648 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 OR52R1Q8NGF1 315 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 OR10AC1Q8NH08 325 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 RNASEH2CQ8TDP1 164 aaKnown RBP16.83■□□□□ 0.28
HOXC6-202ENST00000394331 CCDC3Q9BQI4 270 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 KLHDC2Q9Y2U9 406 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 CHD9Q3L8U1 2897 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 LOC100509620A0A075B734 347 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 A0A1B0GVT2 93 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 DVL1O14640 695 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 TGOLN2O43493 480 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 SPARCP09486 303 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 PLAURQ03405 335 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 ZNHIT3Q15649 155 aaPredicted RBP16.83■□□□□ 0.28
HOXC6-202ENST00000394331 MOGAT2Q3SYC2 334 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 ZNF385CQ66K41 422 aaPredicted RBP16.83■□□□□ 0.28
HOXC6-202ENST00000394331 HOGA1Q86XE5 327 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 MVB12AQ96EY5 273 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 C2orf50Q96LR7 162 aa16.83■□□□□ 0.28
HOXC6-202ENST00000394331 ADAD1Q96M93 576 aaKnown RBP16.83■□□□□ 0.28
HOXC6-202ENST00000394331 GPX7Q96SL4 187 aaPredicted RBP16.83■□□□□ 0.28
HOXC6-202ENST00000394331 CEACAM18A8MTB9 384 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 TNFP01375 233 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 GRPRP30550 384 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 IL2RGP31785 369 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 JOSD1Q15040 202 aaPredicted RBP16.82■□□□□ 0.28
HOXC6-202ENST00000394331 ZNF674Q2M3X9 581 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 ZAR1Q86SH2 424 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 POC1AQ8NBT0 407 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 OR4S1Q8NGB4 309 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 OR51A4Q8NGJ6 313 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 ST7LQ8TDW4 575 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 CA5BP1Q8WTZ4 195 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 GNRHR2Q96P88 292 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 DCBLD2Q96PD2 775 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 FLRT3Q9NZU0 649 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 SYNDIG1LA6NDD5 238 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 SFT2D2O95562 160 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 CSN2P05814 226 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 DANCRP0C864 163 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 RAB6AP20340 208 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 Q6ZSR6 202 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 MED25Q71SY5 747 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 EXD3Q8N9H8 876 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 TERB2Q8NHR7 220 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 PATE1Q8WXA2 126 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 C4orf45Q96LM5 186 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 EIF5A2Q9GZV4 153 aaKnown RBP16.82■□□□□ 0.28
HOXC6-202ENST00000394331 SLC26A1Q9H2B4 701 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 SIRT7Q9NRC8 400 aa16.82■□□□□ 0.28
HOXC6-202ENST00000394331 ACY1Q03154 408 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 HYAL1Q12794 435 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ELOBQ15370 118 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.81■□□□□ 0.28
HOXC6-202ENST00000394331 OOSP2Q86WS3 158 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 SHISA5Q8N114 240 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 PRSS35Q8N3Z0 413 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 LFNGQ8NES3 379 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ZPLD1Q8TCW7 415 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 LMF2Q9BU23 707 aaKnown RBP16.81■□□□□ 0.28
HOXC6-202ENST00000394331 SUCNR1Q9BXA5 334 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 SMOC1Q9H4F8 434 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 TCFL5Q9UL49 500 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 HS3ST3A1Q9Y663 406 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ATG2AQ2TAZ0 1938 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 KIR2DS5A0A0G2JLQ3 304 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 A0A0G2JNG1 304 aa16.81■□□□□ 0.28
HOXC6-202ENST00000394331 ELOA3DA6NLF2 546 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms