RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CYP4Z1Q86W10 505 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 LY6G5BQ8NDX9 201 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 FANK1Q8TC84 345 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ST8SIA4Q92187 359 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 RCN3Q96D15 328 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ZNF799Q96GE5 643 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 ERMAPQ96PL5 475 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-202ENST00000393773 NMNAT3Q96T66 252 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 FUZQ9BT04 418 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 FN3KQ9H479 309 aa12.63□□□□□ -0.39
CHMP3-202ENST00000393773 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
CHMP3-202ENST00000393773 MRPL15Q9P015 296 aaKnown RBP12.63□□□□□ -0.39
CHMP3-202ENST00000393773 IGHV3OR15-7A0A075B7D8 119 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 NME4O00746 187 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 KRT34O76011 436 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 LHBP01229 141 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 PSKH1P11801 424 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 TPTEP56180 551 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 LIPEQ05469 1076 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 PCK2Q16822 640 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 RFX4Q33E94 735 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 CGB2Q6NT52 195 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 FKBP9P1Q75LS8 142 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 ARPINQ7Z6K5 226 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 SLC15A3Q8IY34 581 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 DHRS1Q96LJ7 313 aa12.62□□□□□ -0.39
CHMP3-202ENST00000393773 SRA1Q9HD15 236 aaKnown RBP12.62□□□□□ -0.39
CHMP3-202ENST00000393773 RPRD1BQ9NQG5 326 aaKnown RBP12.62□□□□□ -0.39
CHMP3-202ENST00000393773 A6NLC8 198 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 HMGB1P1B2RPK0 211 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-202ENST00000393773 RNASEK-C17orf49H0YIS7 233 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-202ENST00000393773 ARPC3O15145 178 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 HIST1H1CP16403 213 aaKnown RBP12.61□□□□□ -0.39
CHMP3-202ENST00000393773 DLX1P56177 255 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 PRB3Q04118 309 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-202ENST00000393773 POU4F2Q12837 409 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 SLC36A3Q495N2 470 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 WDR86Q86TI4 376 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 FAM216BQ8N7L0 139 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 OR2AJ1Q8NGZ0 328 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 OR52D1Q9H346 318 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 CNTD2Q9H8S5 307 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 SIRT7Q9NRC8 400 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 ADA2Q9NZK5 511 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 NDUFAF4Q9P032 175 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 ONECUT1Q9UBC0 465 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 AURKCQ9UQB9 309 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 AP3M1Q9Y2T2 418 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 FAM96BQ9Y3D0 163 aa12.61□□□□□ -0.39
CHMP3-202ENST00000393773 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 hCG_1807616A0A1W2PRN6 198 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 PIN1P1O15428 100 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 RENP00797 406 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 PRB2P02812 416 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-202ENST00000393773 OPN1MWP04001 364 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 GRPP07492 148 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 OPN1MW2P0DN77 364 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 OPN1MW3P0DN78 364 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 TGFBR2P37173 567 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 RPS27P42677 84 aaKnown RBP12.6□□□□□ -0.39
CHMP3-202ENST00000393773 GSK3BP49841 420 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 SLC7A2P52569 658 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 KLRD1Q13241 179 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 C8orf82Q6P1X6 216 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-202ENST00000393773 GALNT4Q8N4A0 578 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 Q8N7P7 452 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 SDR9C7Q8NEX9 313 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 OR56B2PQ8NGI1 322 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 OR4K13Q8NH42 304 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 NPRL2Q8WTW4 380 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 SPTSSAQ969W0 71 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 KCNG2Q9UJ96 466 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 CAPN7Q9Y6W3 813 aa12.6□□□□□ -0.39
CHMP3-202ENST00000393773 GGT3PA6NGU5 568 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 BHLHE40O14503 412 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 NPFFO15130 113 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 ALX3O95076 343 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 TROVE2P10155 538 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHMP3-202ENST00000393773 RHCEP18577 417 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 SLC6A6P31641 620 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 SAA4P35542 130 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 HERPUD1Q15011 391 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 DRAM2Q6UX65 266 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 C11orf53Q8IXP5 236 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 FAM86B1Q8N7N1 296 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 SPERTQ8NA61 448 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 OR5R1Q8NH85 324 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 C7orf34Q96L11 122 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 DMRTB1Q96MA1 342 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 CCL13Q99616 98 aa12.59□□□□□ -0.39
CHMP3-202ENST00000393773 KRCC1Q9NPI7 259 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-202ENST00000393773 FBLN5Q9UBX5 448 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms