RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SLC22A25Q6T423 547 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 SYNPRQ8TBG9 265 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 SLC7A6Q92536 515 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 C1QTNF6Q9BXI9 259 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 PURGQ9UJV8 347 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 IKZF2Q9UKS7 526 aa11.36□□□□□ -0.59
USP44-202ENST00000393091 DIDO1Q9BTC0 2240 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
USP44-202ENST00000393091 F5H5K5 113 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 MYL12BO14950 172 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 DHRS3O75911 302 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 LALBAP00709 142 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 SERPINF1P36955 418 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 RPS11P62280 158 aaKnown RBP eCLIP11.35□□□□□ -0.59
USP44-202ENST00000393091 ZNF92Q03936 586 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 SNTB1Q13884 538 aaKnown RBP11.35□□□□□ -0.59
USP44-202ENST00000393091 AGAP6Q5VW22 663 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 PAMR1Q6UXH9 720 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.35□□□□□ -0.59
USP44-202ENST00000393091 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 ABHD4Q8TB40 342 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 REEP6Q96HR9 211 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 SLC30A2Q9BRI3 323 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 CISD1Q9NZ45 108 aaKnown RBP11.35□□□□□ -0.59
USP44-202ENST00000393091 CCL2P13500 99 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 PSG7Q13046 419 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 OR8G5Q8NG78 346 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 UBASH3BQ8TF42 649 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 OPALINQ96PE5 141 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 TBX5Q99593 518 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 TLNRD1Q9H1K6 362 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 ZDHHC8Q9ULC8 765 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 GRIP1Q9Y3R0 1128 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 ATP23Q9Y6H3 246 aa11.35□□□□□ -0.59
USP44-202ENST00000393091 TRBV5-7A0A0A0MS05 114 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 E9PI62 339 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 J3QLW9 94 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 LCATP04180 440 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 ZNF19P17023 458 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 GSK3AP49840 483 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 KLF3P57682 345 aaPredicted RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 CDH26Q8IXH8 852 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 PGAM5Q96HS1 289 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 MRPL37Q9BZE1 423 aaKnown RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 GPR160Q9UJ42 338 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 SIRT4Q9Y6E7 314 aaPredicted RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 C5orf63A6NC05 138 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 GMDSO60547 372 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 MTRF1O75570 445 aaKnown RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 FSTP19883 344 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 MPV17P39210 176 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 GATA4P43694 442 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 PCGF3Q3KNV8 242 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 ZMAT1Q5H9K5 638 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 OR2G6Q5TZ20 316 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 FAM57BQ71RH2 274 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 PARP16Q8N5Y8 322 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 MRPS26Q9BYN8 205 aaKnown RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 OR2J1Q9GZK6 312 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 NDUFB11Q9NX14 153 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 EDARQ9UNE0 448 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 HELZ2Q9BYK8 2649 aaKnown RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 A1L4Q6 167 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 MAGEA13PA6NCF6 341 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 PTGES3LE9PB15 166 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 ACAA1P09110 424 aaPredicted RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 OR4A8P0C604 315 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 CFPP27918 469 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 FBXL14Q8N1E6 418 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 TSPAN14Q8NG11 270 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 CLEC4MQ9H2X3 399 aaPredicted RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 BEX4Q9NWD9 120 aaPredicted RBP11.34□□□□□ -0.59
USP44-202ENST00000393091 ZNF281Q9Y2X9 895 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 MPC1Q9Y5U8 109 aa11.34□□□□□ -0.59
USP44-202ENST00000393091 PCNX1Q96RV3 2341 aa11.33□□□□□ -0.59
USP44-202ENST00000393091 CD200P41217 278 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 FAM76BQ5HYJ3 339 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 SPERTQ8NA61 448 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
USP44-202ENST00000393091 OR5M11Q96RB7 305 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 IFNL4K9M1U5 179 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 ZFPL1O95159 310 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 RAF1P04049 648 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 ANXA2P07355 339 aaKnown RBP11.33□□□□□ -0.6
USP44-202ENST00000393091 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
USP44-202ENST00000393091 OR5AK2Q8NH90 309 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 GATAD2BQ8WXI9 593 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 CMBLQ96DG6 245 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 PTTG3PQ9NZH4 202 aa11.33□□□□□ -0.6
USP44-202ENST00000393091 MAGEB4O15481 346 aaPredicted RBP11.32□□□□□ -0.6
USP44-202ENST00000393091 MAP2K3P46734 347 aa11.32□□□□□ -0.6
USP44-202ENST00000393091 ALDH3B2P48448 385 aa11.32□□□□□ -0.6
USP44-202ENST00000393091 FABP6P51161 128 aa11.32□□□□□ -0.6
USP44-202ENST00000393091 PRKXP51817 358 aa11.32□□□□□ -0.6
USP44-202ENST00000393091 ZNF181Q2M3W8 571 aa11.32□□□□□ -0.6
USP44-202ENST00000393091 PP6455Q8WZ26 134 aa11.32□□□□□ -0.6
USP44-202ENST00000393091 GSX2Q9BZM3 304 aa11.32□□□□□ -0.6
USP44-202ENST00000393091 MYOZ1Q9NP98 299 aaPredicted RBP11.32□□□□□ -0.6
USP44-202ENST00000393091 IGFBP3P17936 291 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms