RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GRHL3Q8TE85 626 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 BADQ92934 168 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 SEH1LQ96EE3 360 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 GPER1Q99527 375 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 FAM103A1Q9BTL3 118 aaKnown RBP6.9□□□□□ -1.31
VTI1A-201ENST00000393077 PCED1AQ9H1Q7 454 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 SLC35D1Q9NTN3 355 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 DEC1Q9P2X7 70 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 SLC7A7Q9UM01 511 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 FUT9Q9Y231 359 aa6.9□□□□□ -1.31
VTI1A-201ENST00000393077 J3QR89 54 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 GRM6O15303 877 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 OR7C2O60412 319 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 RBMXL2O75526 392 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 GLCEO94923 617 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 AMBPP02760 352 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 DOC2BQ14184 412 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CRMP1Q14194 572 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 EIPR1Q53HC9 387 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CHRDL2Q6WN34 429 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 Q6ZVU0 165 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 DND1Q8IYX4 353 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 C12orf76Q8N812 135 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SCGB1C1Q8TD33 95 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CYB5D2Q8WUJ1 264 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CNTD2Q9H8S5 307 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CHST11Q9NPF2 352 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 GNG13Q9P2W3 67 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 OR2AG2A6NM03 316 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 B4DEV8 164 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 FFAR1O14842 300 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CD5P06127 495 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CT45A8P0DMV1 189 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CT45A9P0DMV2 189 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 FOLR1P15328 257 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SELEP16581 610 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 FHITP49789 147 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 LCN6P62502 163 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 MRPS34P82930 218 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 RING1Q06587 406 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 NFATC2Q13469 925 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CT45A2Q5DJT8 189 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 LHX8Q68G74 356 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 IL22RA1Q8N6P7 574 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 ZFP62Q8NB50 900 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 OR4S1Q8NGB4 309 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SMIM8Q96KF7 97 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 MACROD1Q9BQ69 325 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SIDT1Q9NXL6 827 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 DHDHQ9UQ10 334 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CHD3Q12873 2000 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 NKX6-3A6NJ46 265 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 MTX2O75431 263 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 OR4A8P0C604 315 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 TEAD1P28347 426 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 ERVS71-1P61550 626 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 LSM11P83369 360 aaKnown RBP eCLIP6.89□□□□□ -1.315e-11■■■■□ 26
VTI1A-201ENST00000393077 HSF1Q00613 529 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 GGTA1PQ4G0N0 100 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 GXYLT1Q4G148 440 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 FBLN7Q53RD9 439 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 C1orf194Q5T5A4 169 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 STAC2Q6ZMT1 411 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 ABHD3Q8WU67 409 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 BORCS7Q96B45 105 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 STARD4Q96DR4 205 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SEPSECSQ9HD40 501 aaKnown RBP6.89□□□□□ -1.31
VTI1A-201ENST00000393077 CCL27Q9Y4X3 112 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 SCN1AP35498 2009 aa6.89□□□□□ -1.31
VTI1A-201ENST00000393077 LOC100289279A0A1B0GTE1 492 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 PRAMEF27A3QJZ7 478 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 PRAMEF25A6NGN4 478 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 SERPINE3A8MV23 424 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 HHLA1C9JL84 531 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 H0YL77 283 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 PRAMEF4O60810 478 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 DUS4LO95620 317 aaKnown RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 OMGP23515 440 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 NPY4RP50391 375 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 MMP16P51512 607 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 UBE2V1Q13404 147 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 MRPL49Q13405 166 aaKnown RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF266Q14584 549 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 PRAMEF9Q5VWM5 478 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 VWA1Q6PCB0 445 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF440Q8IYI8 595 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 OR4K15Q8NH41 348 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 MARCH1Q8TCQ1 289 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 RPUSD4Q96CM3 377 aaKnown RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 MVB12AQ96EY5 273 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 SLC41A2Q96JW4 573 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 TRMT61BQ9BVS5 477 aaKnown RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 CLEC5AQ9NY25 188 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 OR6C3Q9NZP0 311 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms