RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SHOXO15266 292 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 MGMTP16455 207 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 NFYBP25208 207 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 CHATP28329 748 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 ARF1P84077 181 aaKnown RBP14.84□□□□□ -0.03
SCN3B-202ENST00000392770 ZNF85Q03923 595 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 COL13A1Q5TAT6 717 aaPredicted RBP14.84□□□□□ -0.03
SCN3B-202ENST00000392770 C1QL3Q5VWW1 255 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 TIGD3Q6B0B8 471 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 RHOUQ7L0Q8 258 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 LGI3Q8N145 548 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 UPRTQ96BW1 309 aa14.84□□□□□ -0.03
SCN3B-202ENST00000392770 SLC17A2O00624 439 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 TRAPPC2P0DI81 140 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 TRAPPC2BP0DI82 140 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 DCTDP32321 178 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 MMP15P51511 669 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 CRIPAKQ8N1N5 446 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 C17orf47Q8NEP4 570 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 TMEM68Q96MH6 324 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 EGLN1Q9GZT9 426 aa14.83□□□□□ -0.03
SCN3B-202ENST00000392770 LRP5LA4QPB2 252 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 IGKV1D-16P01601 117 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 CTLA4P16410 223 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 GSG1Q2KHT4 349 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 KISS1RQ969F8 398 aaPredicted RBP14.83□□□□□ -0.04
SCN3B-202ENST00000392770 SULT1C2O00338 296 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 TMEM127O75204 238 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 ZFPL1O95159 310 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 CRYAAP02489 173 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 GALP22466 123 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 GPM6AP51674 278 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 GUCA2AQ02747 115 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 CDONQ4KMG0 1287 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 GALNT16Q8N428 558 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 SUMF1Q8NBK3 374 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 RDH5Q92781 318 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 GPR87Q9BY21 358 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 LUZP4Q9P127 313 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 SBF1O95248 1867 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 RGS11O94810 467 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 CD79BP40259 229 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 FUT6P51993 359 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 DYRK1AQ13627 763 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 SLC25A26Q70HW3 274 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 APOBEC3DQ96AK3 386 aaPredicted RBP14.83□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF501Q96CX3 271 aaPredicted RBP14.83□□□□□ -0.04
SCN3B-202ENST00000392770 RAB1AP62820 205 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 MC2RQ01718 297 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 C4orf45Q96LM5 186 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 KLK11Q9UBX7 282 aa14.83□□□□□ -0.04
SCN3B-202ENST00000392770 EXO1Q9UQ84 846 aaKnown RBP14.83□□□□□ -0.04
SCN3B-202ENST00000392770 KIR2DL3P43628 341 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 OSR2Q8N2R0 312 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 SCCPDHQ8NBX0 429 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 RBM38Q9H0Z9 239 aaKnown RBP14.82□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF732B4DXR9 585 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 OPRM1P35372 400 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 ALKBH6Q3KRA9 238 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 TMUB2Q71RG4 321 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 CLDN1O95832 211 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 CRYABP02511 175 aaKnown RBP14.82□□□□□ -0.04
SCN3B-202ENST00000392770 PCNPQ8WW12 178 aaKnown RBP14.82□□□□□ -0.04
SCN3B-202ENST00000392770 FYTTD1Q96QD9 318 aaKnown RBP14.82□□□□□ -0.04
SCN3B-202ENST00000392770 C4orf51C9J302 202 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 TOR1AO14656 332 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 FOXL2P58012 376 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 ETFDHQ16134 617 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 FBXO4Q9UKT5 387 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 ST3GAL6Q9Y274 331 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 RLFQ13129 1914 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 TRGV8A0A0C4DH27 118 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 IFNA4P05014 189 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 CTXN2P0C2S0 81 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 NDUFB7P17568 137 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 S100A11P31949 105 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 OR2A2Q6IF42 318 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 ZNF774Q6NX45 483 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 GFRALQ6UXV0 394 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 GHRLQ9UBU3 117 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 ICAM5Q9UMF0 924 aa14.82□□□□□ -0.04
SCN3B-202ENST00000392770 TMEM272A0A1B0GTI8 110 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 LIPT2A6NK58 231 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 EPPINO95925 133 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 GIPP09681 153 aaPredicted RBP14.81□□□□□ -0.04
SCN3B-202ENST00000392770 GABRB1P18505 474 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 BTLAQ7Z6A9 289 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 OR51H1Q8NH63 302 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 SMIM4Q8WVI0 70 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 FBXO7Q9Y3I1 522 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 LSM11P83369 360 aaKnown RBP eCLIP14.81□□□□□ -0.04
SCN3B-202ENST00000392770 PEA15Q15121 130 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 KANSL1Q7Z3B3 1105 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 LSRQ86X29 649 aaPredicted RBP14.81□□□□□ -0.04
SCN3B-202ENST00000392770 ADGRG3Q86Y34 549 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 UBL7Q96S82 380 aaPredicted RBP14.81□□□□□ -0.04
SCN3B-202ENST00000392770 OPA3Q9H6K4 179 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 ZSWIM8A7E2V4 1837 aa14.81□□□□□ -0.04
SCN3B-202ENST00000392770 UBE2MP61081 183 aaKnown RBP14.81□□□□□ -0.04
SCN3B-202ENST00000392770 NPEPL1Q8NDH3 523 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms