RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 OR2Z1Q8NG97 314 aa2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 C18orf15Q96N68 181 aa2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 NUP58Q9BVL2 599 aa2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 MRM3Q9HC36 420 aaKnown RBP2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 RETNQ9HD89 108 aa2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 RRAGDQ9NQL2 400 aaPredicted RBP2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 TAS2R1Q9NYW7 299 aa2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 ZSWIM8A7E2V4 1837 aa2.4□□□□□ -2.03
SNORA40.4-201ENST00000390971 C4orf51C9J302 202 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 J3QRE1 110 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 RNF13O43567 381 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 RAD1O60671 282 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 FTH1P02794 183 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 OTX1P32242 354 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 NDUFA8P51970 172 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 BTN1A1Q13410 526 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 DEFB134Q4QY38 66 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 SMARCD3Q6STE5 483 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 TAS2R42Q7RTR8 314 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 RXFP4Q8TDU9 374 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 RASD2Q96D21 266 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 ZBED3Q96IU2 234 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 TMEM38AQ9H6F2 299 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 HES2Q9Y543 173 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 LRRC42Q9Y546 428 aa2.39□□□□□ -2.03
SNORA40.4-201ENST00000390971 LSM1O15116 133 aaKnown RBP2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 HUS1O60921 280 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 USF1P22415 310 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 CD70P32970 193 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 PFN2P35080 140 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 TAS2R43P59537 309 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 IFITM3Q01628 133 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 TMEM69Q5SWH9 247 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 OPN5Q6U736 354 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 PHOSPHO2Q8TCD6 241 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 ZNF606Q8WXB4 792 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 RERGQ96A58 199 aaPredicted RBP2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 OR4K3Q96R72 315 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 KCNS3Q9BQ31 491 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 C20orf24Q9BUV8 137 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 ZYG11BQ9C0D3 744 aa2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 FARSAQ9Y285 508 aaKnown RBP2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 YARS2Q9Y2Z4 477 aaKnown RBP2.38□□□□□ -2.03
SNORA40.4-201ENST00000390971 TSPOAP1O95153 1857 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 CENPBD1B2RD01 187 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 CD28P10747 220 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 HRES1P13985 223 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 PRKACBP22694 351 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 PBLDP30039 288 aaPredicted RBP2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 MRPL19P49406 292 aaKnown RBP2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 MEF2CQ06413 473 aaPredicted RBP2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 SPESP1Q6UW49 350 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 TMPRSS11AQ6ZMR5 421 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 SLC26A10Q8NG04 563 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 OR9G4Q8NGQ1 327 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 KCNS1Q96KK3 526 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 ACTR3CQ9C0K3 210 aaPredicted RBP2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 RGS18Q9NS28 235 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 TRIP11Q15643 1979 aa2.37□□□□□ -2.03
SNORA40.4-201ENST00000390971 EIF3HO15372 352 aaKnown RBP eCLIP2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 CIB2O75838 187 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 SCELO95171 688 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 HBE1P02100 147 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 PGA5P0DJD9 388 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 INAFM2P0DMQ5 153 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 RAB4AP20338 218 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 BCKDHBP21953 392 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 HLA-DMAP28067 261 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 TNFRSF9Q07011 255 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 NAB1Q13506 487 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 ZNF829Q3KNS6 432 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 GCSAMLQ5JQS6 135 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 BPIFCQ8NFQ6 507 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 OR4C5Q8NGB2 326 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 ENKURQ8TC29 256 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 ZNF442Q9H7R0 627 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 ANKRA2Q9H9E1 313 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 DYRK4Q9NR20 520 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 TAS2R5Q9NYW4 299 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 HMGXB4Q9UGU5 601 aa2.36□□□□□ -2.03
SNORA40.4-201ENST00000390971 GOLGA6L4A6NEF3 574 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 M0R3G1 203 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 SLC9A3R1O14745 358 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 FGFR1OPO95684 399 aaKnown RBP2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 PGA4P0DJD7 388 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 PGA3P0DJD8 388 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 ZNF35P13682 527 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 BMI1P35226 326 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 ELF3P78545 371 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 LIPEQ05469 1076 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 TTC29Q8NA56 475 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 DCAKDQ8WVC6 231 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 XPO6Q96QU8 1125 aaKnown RBP2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 TGS1Q96RS0 853 aaKnown RBP2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 PIGUQ9H490 435 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 AGPAT4Q9NRZ5 378 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 COMMD3-BMI1R4GMX3 469 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 NACADO15069 1562 aa2.35□□□□□ -2.03
SNORA40.4-201ENST00000390971 GOLGA8OA6NCC3 632 aa2.34□□□□□ -2.03
SNORA40.4-201ENST00000390971 A8MWL6 223 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms