RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF239Q16600 458 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 SKA3Q8IX90 412 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 LGI3Q8N145 548 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 TMEM52Q8NDY8 209 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 CNTD2Q9H8S5 307 aa11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 NPDC1Q9NQX5 325 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-201ENST00000389328 TK1P04183 234 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 C17orf67Q0P5P2 114 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 NR0B2Q15466 257 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 TAF9Q16594 264 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 MOB3CQ70IA8 216 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR1J1Q8NGS3 322 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 RXFP4Q8TDU9 374 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 TNFSF18Q9UNG2 199 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 PIGLQ9Y2B2 252 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 FGF2P09038 288 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 SCAND1P57086 179 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 PPP1CAP62136 330 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 PLCXD3Q63HM9 321 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 TMEM123Q8N131 208 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 DTWD2Q8NBA8 298 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 PIGQQ9BRB3 760 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 KCNMB2Q9Y691 235 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 EML2O95834 649 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 HPP00738 406 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 HTRA3P83110 453 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 RPL19P84098 196 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 PCK2Q16822 640 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 MESTQ5EB52 335 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 hCG_1809904A0A1W2PP81 198 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 A0A1W2PR64 198 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 A0A1W2PRV1 198 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 CD300LBA8K4G0 201 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 ICAM2P13598 275 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 FAM53BQ14153 422 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 NCMAPQ5T1S8 102 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 PARM1Q6UWI2 310 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 C5orf46Q6UWT4 87 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 GPX8Q8TED1 209 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 KISS1RQ969F8 398 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 ARHGAP5-AS1Q96IT6 56 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 SHARPINQ9H0F6 387 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF275Q9NSD4 429 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 MIOXQ9UGB7 285 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 AK3Q9UIJ7 227 aa11.8□□□□□ -0.52
TRAPPC9-201ENST00000389328 A0A1W2PNR3 127 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR5H8P0DN80 308 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 CNN3Q15417 329 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 CD226Q15762 336 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 MR1Q95460 341 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 GAB2Q9UQC2 676 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 TLE4Q04727 773 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 ANKRD33Q7Z3H0 272 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 ADAD2Q8NCV1 583 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 RBMXL1Q96E39 390 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 KCNE5Q9UJ90 142 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 SCN2AQ99250 2005 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 PDCD11Q14690 1871 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 METTL12A8MUP2 240 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 IL33O95760 270 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 GSTP1P09211 210 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 ACAA2P42765 397 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 RPS15P62841 145 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 C2orf68Q2NKX9 166 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 CDC20BQ86Y33 519 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 MITD1Q8WV92 249 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 RGP1Q92546 391 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 MAGT1Q9H0U3 335 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 GPR173Q9NS66 373 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 GAR1Q9NY12 217 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 CABIN1Q9Y6J0 2220 aa11.79□□□□□ -0.52
TRAPPC9-201ENST00000389328 A0A0G2JMZ2 1700 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 LRRC37A2A6NM11 1700 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 A6NLC8 198 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 G3V3Y1 287 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 TNFRSF10CO14798 259 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR2A4O95047 310 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 CST4P01036 141 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 HPNP05981 417 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 ABCD3P28288 659 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PIGPP57054 158 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 C9orf152Q5JTZ5 239 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR2A7Q96R45 310 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PRRX2Q99811 253 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 NECAP2Q9NVZ3 263 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 AMDHD2Q9Y303 409 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 E5RGE8 158 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 CYB5BO43169 146 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 MT-ND4LP03901 98 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 NAT2P11245 290 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms