RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SFRP5Q5T4F7 317 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 GSG1LQ6UXU4 331 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 FOXL2NBQ6ZUU3 175 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 OR6K3Q8NGY3 331 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 SSC4DQ8WTU2 575 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.29
SCFD2-201ENST00000388940 TMEM54Q969K7 222 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 WBP1Q96G27 269 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 C1orf147Q96MC9 270 aaPredicted RBP13.21□□□□□ -0.29
SCFD2-201ENST00000388940 LPAR5Q9H1C0 372 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 ZNF319Q9P2F9 582 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 ANAPC10Q9UM13 185 aa13.21□□□□□ -0.29
SCFD2-201ENST00000388940 TRAV14DV4A0A0A6YYC5 116 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 D6RAR5 112 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 VAMP5O95183 116 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 GSTP1P09211 210 aaKnown RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 ZBTB25P24278 435 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 CD34P28906 385 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 AGTR1P30556 359 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 CASRP41180 1078 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 CLDN17P56750 224 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 SORDQ00796 357 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 PEAR1Q5VY43 1037 aaPredicted RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 GLIPR1L1Q6UWM5 242 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 LYG2Q86SG7 212 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 CD163Q86VB7 1156 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 KCNG3Q8TAE7 436 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 MRGPRFQ96AM1 343 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 SELENOIQ9C0D9 397 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 SH2D2AQ9NP31 389 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 IFT46Q9NQC8 304 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 MRPS28Q9Y2Q9 187 aaKnown RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 ATP6V1G2-DDX39BF2Z307 99 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 SSX5O60225 188 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 KLF7O75840 302 aaPredicted RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 IGLV3-1P01715 115 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 CELA2AP08217 269 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 TDGF1P13385 188 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 GNB3P16520 340 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 KLK2P20151 261 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 DSCR4P56555 118 aaPredicted RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 ZFP36L1Q07352 338 aaKnown RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 GVQW1Q8N7I0 195 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF283Q8N7M2 679 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 AGBL5Q8NDL9 886 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 OR14K1Q8NGZ2 314 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 PAQR8Q8TEZ7 354 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 NUDCD2Q8WVJ2 157 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 PROK2Q9HC23 129 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
SCFD2-201ENST00000388940 KCNK7Q9Y2U2 307 aa13.2□□□□□ -0.3
SCFD2-201ENST00000388940 HLA-AP01891 365 aaKnown RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 UBBP0CG47 229 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 SLC2A1P11166 492 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 LIFP15018 202 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 DUSP3P51452 185 aaPredicted RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 GK2Q14410 553 aaPredicted RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 NKPD1Q17RQ9 610 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 SHEQ5VZ18 495 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 RGS7BPQ6MZT1 257 aaPredicted RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF101Q8IZC7 436 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 BEST3Q8N1M1 668 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 RBPMSQ93062 196 aaKnown RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 MR1Q95460 341 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 SOX7Q9BT81 388 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF416Q9BWM5 594 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 NELFAQ9H3P2 528 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 NOSIPQ9Y314 301 aaKnown RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 PTRH2Q9Y3E5 179 aaKnown RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 hCG_1807616A0A1W2PRN6 198 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 GDF9O60383 454 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 CDC14BO60729 498 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 CSN2P05814 226 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 NMBP08949 121 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 SLC25A4P12235 298 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF250P15622 560 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 ATF4P18848 351 aaPredicted RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 MSR1P21757 451 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 MPGP29372 298 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 CD96P40200 585 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 GUCA1AP43080 201 aaPredicted RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 CSNK1A1P48729 337 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 SSR4P51571 173 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 HIST1H3AP68431 136 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 MC2RQ01718 297 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 PNLIPRP3Q17RR3 467 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 HIST2H3PS2Q5TEC6 136 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 LIN54Q6MZP7 749 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 HIST2H3AQ71DI3 136 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
SCFD2-201ENST00000388940 REG4Q9BYZ8 158 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 RDH8Q9NYR8 311 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 FBXO4Q9UKT5 387 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 HS3ST3B1Q9Y662 390 aa13.19□□□□□ -0.3
SCFD2-201ENST00000388940 A0A0A6YYD4 124 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms