RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 SEMA6CQ9H3T2 930 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 LHX3Q9UBR4 397 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TMEM131Q92545 1883 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 HS3ST1O14792 307 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 CTSAP10619 480 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 CLDN2P57739 230 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 MED25Q71SY5 747 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 LRRTM3Q86VH5 581 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 SLC25A35Q3KQZ1 300 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 SPOCK3Q9BQ16 436 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TIMM29Q9BSF4 260 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 SLC25A37Q9NYZ2 338 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 CTSFQ9UBX1 484 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TMED7-TICAM2A0A0A6YYA0 188 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 PTGESO14684 152 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 HNRNPA1P09651 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 RNASEKQ6P5S7 137 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TMEM104Q8NE00 496 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 APOOQ9BUR5 198 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 SH3BGRL2Q9UJC5 107 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 RALYQ9UKM9 306 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TMED7Q9Y3B3 224 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 KIR2DS5A0A0G2JLQ3 304 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 A0A0G2JNG1 304 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 KIR2DS3K7RE56 304 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 GALP22466 123 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 RFC3P40938 356 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 RPL24P83731 157 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 KIR2DS5Q14953 304 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 TMEM241Q24JQ0 296 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 PRSS36Q5K4E3 855 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 ZDHHC22Q8N966 263 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 EDEM2Q9BV94 578 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 LRIT1Q9P2V4 623 aa11.31□□□□□ -0.6
SRGAP3-202ENST00000383836 FZD6O60353 706 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 PI3P19957 117 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 C17orf67Q0P5P2 114 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 FAM71E1Q6IPT2 247 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 CRYGNQ8WXF5 182 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 IL22RA2Q969J5 263 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 Q96M85 177 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NAT8BQ9UHF3 227 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 TIMM8AO60220 97 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ADH4P08319 380 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 P2RY2P41231 377 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 TTC9Q92623 222 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ADGRL4Q9HBW9 690 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NHSQ6T4R5 1651 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 UBE2L5PA0A1B0GUS4 154 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF732B4DXR9 585 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 SLC48A1Q6P1K1 146 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NKAIN4Q8IVV8 208 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 TTC9BQ8N6N2 239 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NPAS1Q99742 590 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ELOVL1Q9BW60 279 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 TXNRD2Q9NNW7 524 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 CACFD1Q9UGQ2 172 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 COL22A1Q8NFW1 1626 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 KIAA1324LA8MWY0 1029 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ZFAND5O76080 213 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 C1SP09871 688 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 SULT1A3P0DMM9 295 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 SULT1A4P0DMN0 295 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 PTHLHP12272 177 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 RPL27P61353 136 aaKnown RBP11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ANKRD34AQ69YU3 496 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 MFSD12Q6NUT3 480 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF813Q6ZN06 617 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 IGKV6D-21A0A0A0MT36 114 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 K7ERU9 68 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 M0R1X1 148 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 GLI4P10075 376 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NTSR1P30989 418 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ZNF718Q3SXZ3 478 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 OR4S1Q8NGB4 309 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 DERL3Q96Q80 235 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 RHNO1Q9BSD3 238 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 CACNA1GO43497 2377 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ACAA1P09110 424 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 IAPPP10997 89 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NHLH1Q02575 133 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NHLH2Q02577 135 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 ELOBQ15370 118 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 OR8B4Q96RC9 309 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 SDK2Q58EX2 2172 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 SNAI1O95863 264 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NID1P14543 1247 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 NDFIP1Q9BT67 221 aa11.3□□□□□ -0.6
SRGAP3-202ENST00000383836 C4orf47A7E2U8 309 aa11.29□□□□□ -0.6
SRGAP3-202ENST00000383836 FOLR3P41439 243 aa11.29□□□□□ -0.6
SRGAP3-202ENST00000383836 PNLIPRP3Q17RR3 467 aa11.29□□□□□ -0.6
SRGAP3-202ENST00000383836 LHFPL2Q6ZUX7 228 aa11.29□□□□□ -0.6
SRGAP3-202ENST00000383836 OR2A1Q8NGT9 310 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms