RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 OR6N2Q8NGY6 317 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 SYNPRQ8TBG9 265 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 SESN1Q9Y6P5 492 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 V9GY05 133 aa10.96□□□□□ -0.65
CIITA-202ENST00000381835 RP1L1Q8IWN7 2480 aaPredicted RBP10.96□□□□□ -0.65
CIITA-202ENST00000381835 ANKRD20A5PA0PJZ0 165 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 PSMD9O00233 223 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 BET1O15155 118 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 SULT1B1O43704 296 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 RGS11O94810 467 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 MPZL1O95297 269 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 HOXD4P09016 255 aaPredicted RBP10.96□□□□□ -0.66
CIITA-202ENST00000381835 QDPRP09417 244 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 PTHLHP12272 177 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 NTF4P34130 210 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 MAGEB1P43366 347 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 PTH2RP49190 550 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 RAP2BP61225 183 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 DHODHQ02127 395 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 MEP1BQ16820 701 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 LINC00303Q3SY05 128 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 RPUSD3Q6P087 351 aaKnown RBP10.96□□□□□ -0.66
CIITA-202ENST00000381835 SLC16A9Q7RTY1 509 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 DPY19L4Q7Z388 723 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 LILRB1Q8NHL6 650 aaPredicted RBP10.96□□□□□ -0.66
CIITA-202ENST00000381835 RNF128Q8TEB7 428 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 MCHR2Q969V1 340 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 INTS14Q96SY0 518 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 C1QTNF6Q9BXI9 259 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 SDHAF2Q9NX18 166 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 FOXJ3Q9UPW0 622 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 ZNF281Q9Y2X9 895 aa10.96□□□□□ -0.66
CIITA-202ENST00000381835 SPTA1P02549 2419 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 AQP7O14520 342 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 ZNF432O94892 652 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 ZP3P21754 424 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 CSNK1A1P48729 337 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 ADAM8P78325 824 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 OLFML2AQ68BL7 652 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.95□□□□□ -0.66
CIITA-202ENST00000381835 OR5M9Q8NGP3 310 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 MRPL22Q9NWU5 206 aaKnown RBP10.95□□□□□ -0.66
CIITA-202ENST00000381835 ING1Q9UK53 422 aaPredicted RBP10.95□□□□□ -0.66
CIITA-202ENST00000381835 DOCK7Q96N67 2140 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 SNAPC5O75971 98 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 CRYABP02511 175 aaKnown RBP10.95□□□□□ -0.66
CIITA-202ENST00000381835 DCTDP32321 178 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 MRPS10P82664 201 aaKnown RBP10.95□□□□□ -0.66
CIITA-202ENST00000381835 HIST3H3Q16695 136 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 PHYHD1Q5SRE7 291 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 ZNF626Q68DY1 528 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 LRFN4Q6PJG9 635 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 AAED1Q7RTV5 226 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 KCTD20Q7Z5Y7 419 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 TMEM123Q8N131 208 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 THEM6Q8WUY1 208 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 RAB40AQ8WXH6 277 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 SARAFQ96BY9 339 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 LINC00052Q96N35 136 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 REG4Q9BYZ8 158 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 C12orf4Q9NQ89 552 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 PLSCR2Q9NRY7 297 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 OR5V1Q9UGF6 321 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 FBXL3Q9UKT7 428 aa10.95□□□□□ -0.66
CIITA-202ENST00000381835 ZGRF1Q86YA3 2104 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
CIITA-202ENST00000381835 MCRIP1C9JLW8 97 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 CDK2P24941 298 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 CDAP32320 146 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 NUP62P37198 522 aaPredicted RBP10.94□□□□□ -0.66
CIITA-202ENST00000381835 ART1P52961 327 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 FAM180AQ6UWF9 173 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 GLB1L2Q8IW92 636 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 MCEMP1Q8IX19 187 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 TUSC5Q8IXB3 177 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 COQ8AQ8NI60 647 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 LHFPL5Q8TAF8 219 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 PNPLA2Q96AD5 504 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 WDR89Q96FK6 387 aaPredicted RBP10.94□□□□□ -0.66
CIITA-202ENST00000381835 WBP1Q96G27 269 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 CXorf58Q96LI9 332 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 AIFM2Q9BRQ8 373 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 MRI1Q9BV20 369 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 PRDM14Q9GZV8 571 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 SLITRK2Q9H156 845 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 CALHM2Q9HA72 323 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 TCF7L1Q9HCS4 588 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 LAMP5Q9UJQ1 280 aa10.94□□□□□ -0.66
CIITA-202ENST00000381835 NOSIPQ9Y314 301 aaKnown RBP10.94□□□□□ -0.66
CIITA-202ENST00000381835 MFSD2BA6NFX1 497 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 SLC22A20A6NK97 555 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 SNRPGP15A8MWD9 76 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 OR2A4O95047 310 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 NDUFB6O95139 128 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 ZFPL1O95159 310 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 IL5P05113 134 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 SPARCP09486 303 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 CALCBP10092 127 aa10.93□□□□□ -0.66
CIITA-202ENST00000381835 NANOS3P60323 173 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms